DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rpk and ppk10

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster


Alignment Length:549 Identity:133/549 - (24%)
Similarity:207/549 - (37%) Gaps:123/549 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 YCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYGCSTLIQSA----YTKWTETPVIVSFAEKS 99
            |..|..|||.:||.:......|:..||.:.:.|||.|..:..|:    |||.|...:     |::
  Fly    22 YFNNCCIHGFRYLTDSMLILFEKFLWLILLIASIYFCIIVCLSSIDRYYTKSTHIGI-----ERN 81

  Fly   100 TPVWNIPFPAVTVCSETKRVL-------KQKGKETTYADLYSQFSEDMRASRVFRPENVSALEME 157
            ...||...|:||||...:..:       :..|.:....|:...|.|::..|.....:|:...|..
  Fly    82 YIFWNTTLPSVTVCPVDRLNITYFADYCRNNGIKGPQRDILWDFLENLANSTYINFQNIPQNEQI 146

  Fly   158 EFRTLLHVCNTQIIEEDIPLIAGDDLDYFDVLQRMLPQFDRYF---FYCRWLSRFGECETFFRKT 219
            :          ||| |||.|   ....|.:::..:  .:||.:   |..|.....|......|:.
  Fly   147 D----------QII-EDIGL---KPEHYTELIYNL--TYDRTYEPNFNERIRCMDGAMFIHVRQV 195

  Fly   220 LTEEGICYTFNGLRATEIYRDDTYQYQHSGE--PLEMENISSQHTAWTLETGYALDSDVETFPAR 282
            |||.|:||..|. :.||.|....:.:....|  ..|.|||                    ..|.:
  Fly   196 LTEWGLCYLGNS-KLTEEYSSRYFIFGKYPEYNKYEYENI--------------------RLPYQ 239

  Fly   283 VLSAGARSGIFLALQSFKQEVDYAC---RGPV------QGFKVGKFENVLLHAPDDVPQVSKQFV 338
            |       |.|     |:::..||.   :||.      ..|:|.|.::...:|.|.         
  Fly   240 V-------GSF-----FQKDTQYALLGFKGPAIIAFAHSAFEVMKVDSNSDYAYDG--------- 283

  Fly   339 RIPMGKEVLIAVKPNMITMSSGIAEYHPV-RRQCFLSHERSLRFFKVYTESNCQLECLANFTLTK 402
                   :|..:....||....:.:...| .|:|...||.:|..|..||.:.||.||..|.....
  Fly   284 -------ILYDLSTEEITAEDNLEQDTTVAMRRCRFPHESNLTHFPFYTRNICQQECRINLAYKI 341

  Fly   403 CGCVKFSMPRNV--DMPVCGEDKIH-CYDRAERELLVREFKRVKALNAGRENSRSVESACNCMPA 464
            |.|:....|..:  ..|||....:. |:...     ...|.::...|...||    .:.|.|...
  Fly   342 CKCIPHFYPNRIANPKPVCDYKTLRSCFPHH-----ASFFLKLYEENGKHEN----PAICYCEQN 397

  Fly   465 CTSLVYNTEISQANFDLEEMLVAEGDTEFLKEYPGSQMSRLSIYFKQSQFITSKRSELYGMTEFL 529
            |...|...:........:::|...|....:|.:|.|::               :|..::.:|:.|
  Fly   398 CHDSVVTMKSMNPMSGAKQLLGGIGSAVSVKTWPQSRL---------------RRQVIFSLTDLL 447

  Fly   530 ANCGGIFGLFMGFSILSLVEMIYHFTLRL 558
            .:.||..|||:|||:|..||:||.||:|:
  Fly   448 VSIGGTAGLFLGFSVLGFVEVIYFFTIRI 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 128/541 (24%)
ppk10NP_001033894.1 ASC 22..471 CDD:279230 129/542 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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