DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and ppk29

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001097442.2 Gene:ppk29 / 37844 FlyBaseID:FBgn0034965 Length:425 Species:Drosophila melanogaster


Alignment Length:555 Identity:109/555 - (19%)
Similarity:189/555 - (34%) Gaps:197/555 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 RPFRERIFWLFVFLISIYGCSTL------------------IQSAYTKWTETPVIVSFAEKSTPV 102
            |.|.|....|::|:|.|.|.||:                  :.:||::|..|             
  Fly    14 RSFVENKGLLWIFVIGISGWSTVSILVLLKTRYETDSTTIGVSTAYSRWINT------------- 65

  Fly   103 WNIPFPAVTVC-------SETKRVLKQKGKETTYADLYSQFSEDMRASRVFRPENVSALEMEEFR 160
                ||::.:|       :|.|.::::..:|    |....|:..:.......|.|:  ...|..:
  Fly    66 ----FPSIGICLTKSRAFNEFKAMMREYFQE----DFAFSFTRMIYEYAFLNPNNI--FTKEPTK 120

  Fly   161 TLLHVCNTQIIEEDIPLIAGDDLDYFDVLQRMLPQ-----FDRYFFYCRWLSRFGECETFFRKTL 220
            ...:..|..|:               |:.::|.|.     |...:|....::   :||..|:..:
  Fly   121 NTSYPYNFNIL---------------DIRRKMFPTNCTECFKEIYFRGELVT---DCEEIFKFHV 167

  Fly   221 TEEGICYTFNGLRATEIYRDDTYQYQHSGEPLEMENISSQHTAWTLETGYALDSD-VETFPARVL 284
            ||.|.|:..|.|                                       ||.| :|..|.|..
  Fly   168 TEMGYCFLANNL---------------------------------------LDYDSIEEMPLRYS 193

  Fly   285 SAGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIA 349
            |......:.|.::|   .|.|            |:| :.:::|:|          :|....:...
  Fly   194 SLDNNRSLRLYMRS---SVMY------------KYE-MYVNSPED----------LPFFNSLTYT 232

  Fly   350 VKPNMITMSSGIAEYH--------PV-RRQCFLSHERSLRFFKVYTESNCQLECLANFTLTKCGC 405
            :..:..|.:..:.|.|        |: :|:|....|.|:..|. |:.|.|.....:.|.:..|.|
  Fly   233 ISTDPTTYAFNVEEIHNHEGVIDEPISQRKCKFPSESSIEGFP-YSFSACMSIIRSEFEMKTCDC 296

  Fly   406 VKFSMPRNVDMPVCGEDKIHCYDRAERELLVRE--FKRVKALNAGRENSRSVESACNCMPACT-- 466
            ..|:.....:...||.....|        |::|  ..|||         ..|.|:..|:|:|.  
  Fly   297 SLFNPKDRNESLYCGLQHADC--------LIKEGFATRVK---------EYVGSSTVCLPSCVEQ 344

  Fly   467 --SLV----YNTEISQANFDLEEMLVAEGDTEFLKEYPGSQMSRLSIYFKQSQFITSKRSELYGM 525
              |||    .|..:...|..:.|:.:|...|                 .:..:.:|..:.:|   
  Fly   345 QISLVGVITENGTLYNNNTQITEIQIASPPT-----------------VRYERKVTQTKLDL--- 389

  Fly   526 TEFLANCGGIFGLFMGFSILSLVEMIYHFTLRLFT 560
               :...|.:.|||.|.|:|:|:|:|.:|..:|.|
  Fly   390 ---IVGIGSVAGLFFGASLLNLLEIISYFIKKLKT 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 105/545 (19%)
ppk29NP_001097442.2 ASC 123..415 CDD:279230 81/415 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456789
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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