DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rpk and ppk

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_477232.1 Gene:ppk / 34843 FlyBaseID:FBgn0020258 Length:606 Species:Drosophila melanogaster


Alignment Length:575 Identity:212/575 - (36%)
Similarity:324/575 - (56%) Gaps:72/575 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DLTFRRRRKAGS--VACEGFITTYHEYCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYGCST 77
            |:..:.|.:.||  .||:|.:.   ||.::|:|||::|:.|..||..|:::|||...||:|...:
  Fly    46 DVIIKSRIRYGSPLSACKGLLL---EYAKSTTIHGIRYIFEVHRPIYEKLYWLFFTCISVYFAVS 107

  Fly    78 LIQSAYTKWTETPVIVSFAEKSTPVWNIPFPAVTVCSETKRVLKQKGKETTYADLYSQFSEDMRA 142
            ||...|.||.|:|||:.|.|...||..||||.:|:|.|    :|.:.....|.::..|..|:.:.
  Fly   108 LIWDTYLKWQESPVILGFDETLVPVHKIPFPTITICPE----IKMERNVFDYTNVSRQLWEEYKQ 168

  Fly   143 SRVFRPENVSALEMEEFRTL---LHVCNTQIIEEDIPLIAGDDLDYFDVLQRML----------P 194
            :     .|:|.|:.|:...:   :|:|::::::...||::..:....||.|.::          |
  Fly   169 N-----GNISDLDDEDLARMAVAMHICDSEVVQRFTPLLSQLNPPNVDVTQTLIDLSISKNETGP 228

  Fly   195 QFDRYFFYCRWLSRFGECETFFRKTLTEEGICYTFNGLRATEIYRDDTY------------QYQH 247
                   :|:|..||..|:..|....|:|||||.|||||..:||||:.:            :|..
  Fly   229 -------FCKWNGRFYFCDKIFDFVATDEGICYQFNGLRPKDIYRDEKFISYVDPDVVDFNKYFD 286

  Fly   248 SGEPLEMENISSQHTAWTLETGYALDSDVETFPARVLSAGARSGIFLALQSFKQEVDYACRGPVQ 312
            ...| ...||:..   |:|:||: :|.....:|.|.:.:..::|.|..||..:...||.||...|
  Fly   287 VDLP-PWNNITGN---WSLDTGF-VDQGQNAYPQRTVFSSVKNGFFAFLQGLQHNFDYDCRSFKQ 346

  Fly   313 GFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIAVKPNMITMSSGIAEYHPVRRQCFLSHER 377
            |:|      |.|::|:.||..:..::.:|.|.|||::|.|..:..:..:.|..|.:|||....||
  Fly   347 GYK------VFLNSPESVPLTTGNYILVPHGDEVLVSVLPAYVVSTDNLHEITPEKRQCLFDDER 405

  Fly   378 SLRFFKVYTESNCQLECLANFTLTKCGCVKFSMPRNVDMPVCGEDKIHCYDRAEREL--LVREFK 440
            |||||:.|::||||.|||||:|::||||.||.||:.:..||||...|:||..|:.||  |::...
  Fly   406 SLRFFRSYSQSNCQTECLANYTVSKCGCAKFWMPKPLGTPVCGLKDINCYTSAQDELYTLMQNQT 470

  Fly   441 RVKALNAGRENSRSVESACNCMPACTSLVYNTEISQANFDLEEMLVAEGDTEFLKEYPGSQM--S 503
            ..|:::      .||:..||||||||||.||.|||:|.:|:.:.:.|     |.:||..:..  |
  Fly   471 MAKSID------ESVDITCNCMPACTSLEYNFEISRAKYDVAKTIRA-----FREEYEHTDAIGS 524

  Fly   504 RLSIYFKQSQFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVEMIYHFTLRL 558
            |||:|||:.||...||:.|:|::..::|||||.|||||.|.||.:|:||.|.:|:
  Fly   525 RLSVYFKEHQFTAIKRTILFGVSTLISNCGGICGLFMGISCLSFLELIYFFCMRI 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 200/541 (37%)
ppkNP_477232.1 ASC 69..574 CDD:279230 201/542 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450001
Domainoid 1 1.000 101 1.000 Domainoid score I6864
eggNOG 1 0.900 - - E1_KOG4294
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 102 1.000 Inparanoid score I4956
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D112386at6656
OrthoFinder 1 1.000 - - FOG0000867
OrthoInspector 1 1.000 - - otm24766
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
109.900

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