DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and ppk18

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_609308.3 Gene:ppk18 / 34295 FlyBaseID:FBgn0265001 Length:553 Species:Drosophila melanogaster


Alignment Length:586 Identity:135/586 - (23%)
Similarity:221/586 - (37%) Gaps:134/586 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 YHEYCRNTSIHGVQ-YLGEQERPFRERIFWLFVFLISIYGCSTLIQSAYTKWTETPVIVSFAEKS 99
            :.|:.|.:.|:|:. :|......:.:.|:..|:..|.|| ...:|.....::...|..:..|...
  Fly    13 FREFLRQSYINGLHPFLYHTPVRYAKAIWLAFLTAIMIY-THIVIADLILEYLVQPTEIHMAPDL 76

  Fly   100 TPVWNIPFPAVTVCSETK---RVLKQKGKETTYAD--LYSQFSEDMRASRVFRPENVSALEMEEF 159
            ..|.|.|||||.||:..|   |:|:      :||:  .:.|.:..::|         .||::::.
  Fly    77 VHVANSPFPAVGVCTSNKINGRLLR------SYAEKLFHHQGNSSLQA---------VALDLDDM 126

  Fly   160 RTLLHVCNTQI----IEEDIPLIAGDDLDYFDVLQRMLPQFDRYFFY-----CRWLSR------- 208
            ...|.|. .|.    :|.|.......:||.   |.|:|..:.....|     .|.||.       
  Fly   127 ANRLLVL-AQFYLNPLESDHERWNATELDR---LHRLLVAYHNGAGYSVRDILRDLSPGCGDLVI 187

  Fly   209 ----FG---ECETFFRKTLTEEGICYTFNGLRATEIYRDDTYQY---QHSGEPLEMENISSQHTA 263
                ||   .....|.|..|...:|..||       ||..:|..   :.:.|..||..:...   
  Fly   188 RGIVFGLPVNASQLFLKRPTSSNVCCIFN-------YRRPSYSQFLTKRAEEDSEMRAVPMV--- 242

  Fly   264 WTLETGYALDS---DVETFPARVLSAGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLH 325
             ..|:...|:|   .::..|...::....|.....|..|.|| |||   .:|...:|:   ||:.
  Fly   243 -VFESNSILNSVQFVLQDTPKEDITNTFHSNSAFQLIIFPQE-DYA---TIQSTTLGE---VLVD 299

  Fly   326 APDDVPQVSKQFVRIPMGKEVLIAVKPNMITMSSGIAEYHPVRRQCFLSHERSLRFF--KVYTES 388
                    ....|.||        ::|...:...|:....|..|:|:.. |..:|..  ..|:..
  Fly   300 --------HYSIVEIP--------IQPMFFSSGDGVRGVPPHIRRCYYP-EEGMRLLNQSYYSLD 347

  Fly   389 NCQLECLANFTLTKCGCVKFSMP---RNVDMPVCGEDKIHCYDRAERELLVREFKRVKALNAG-- 448
            .|.|.|.....:..||||  |.|   .::|:..|....:.|            ..|.|::..|  
  Fly   348 ECLLVCRMKSMIDHCGCV--SPPLTGSSMDLDYCMLPDLPC------------LMRWKSIWYGYS 398

  Fly   449 ------RENSRSVESAC-NCMPAC--TSLVYNTEISQANFDLEEMLVAEG-DTEFLK----EYPG 499
                  .:....|:..| :|:|.|  .|:...|.::    .|.....:.| .|..||    |.| 
  Fly   399 DFAYLQNKEENLVQRQCEHCLPTCNGVSMSITTNVA----PLRRTYNSSGYFTGLLKGLTNERP- 458

  Fly   500 SQMSRLSIYFKQSQFITSKRSELYGMTEFLAN-CGGIFGLFMGFSILSLVEMIYHFTLRLFTNLK 563
              ::.:.::|| .:|..:.:|::......|.| .|||..|..||||:|.:|::|:.|.:.|..:.
  Fly   459 --LAIIKLFFK-LRFAQATKSQMVSSWVVLLNRFGGILSLMYGFSIVSYIEILYYLTGKGFVYIY 520

  Fly   564 R 564
            |
  Fly   521 R 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 130/569 (23%)
ppk18NP_609308.3 ASC 16..510 CDD:279230 130/570 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456780
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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