DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and ppk14

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_609017.2 Gene:ppk14 / 33887 FlyBaseID:FBgn0031803 Length:504 Species:Drosophila melanogaster


Alignment Length:587 Identity:123/587 - (20%)
Similarity:202/587 - (34%) Gaps:195/587 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RKAGSVACEGFITTYHEYCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYGCSTLIQSAY--- 83
            ::|.::..:.:|:..|       |||:..|.......|.|:.|.   |..|..|:.|...:|   
  Fly    35 QRAWTLLIDSYISRSH-------IHGLYLLFLPSMRRRMRVLWA---LALICACTVLFHVSYLLG 89

  Fly    84 ----TKWTETPVIVSFAEKSTPVWNIPFPAVTVCSETKRVLKQKGKETTYADLYSQFSEDMRASR 144
                .|..:|  ||:.|..|  :.:|.||.|.:|::.:                      :..||
  Fly    90 DRYHNKQFQT--IVAHAHAS--IHHIAFPVVIICNKNR----------------------LNWSR 128

  Fly   145 VFRPE-----NVSALEMEEFRTLL--------HVCNT--QIIEEDIPLIAGDDLDYFDVLQRMLP 194
            :  ||     |::..:.|.|..:|        |..|.  .::.|.:..:  :.|::.:::.:|..
  Fly   129 L--PEIKSLYNITPSQDELFDRILTAYDGFSFHKFNAFDSLLGESLDEL--NHLNFTEIVIQMSW 189

  Fly   195 QFDRYFFYCRWLSRFGECETFFRKTLTEEGICYTFNGL---RATEIYRDDTYQYQHSGEPLEMEN 256
            :.|.....|.|.:...:|...||......|.|..||.|   |.||                    
  Fly   190 RCDEILRDCHWQTASRDCCKLFRPRRLPLGYCLAFNELEKRRGTE-------------------- 234

  Fly   257 ISSQHTAWTLETGYALDSDVETFPARVLSAGARSGIFLALQSFKQEVDYA-CRGPVQGFKVGKFE 320
                                         .|..:|:.|.|  ..:|..:| ....::||.:...|
  Fly   235 -----------------------------TGINTGLLLRL--LLREGQHAPGNSGLKGFWLTVVE 268

  Fly   321 NVLLHAPDDVPQVSKQFVRIPMGKEVLIAVKPNMITMSSGIAEYH---------PVR-RQCFLSH 375
                         |..:...|      |.|.|:..|..:..|.||         |.. |.|.:.:
  Fly   269 -------------SSVWFGFP------IEVVPHSRTNVAVTAVYHYFDESTLSLPSSWRHCVMDY 314

  Fly   376 ERSLRFFKV-----YTESNCQLECLANFTLTKCGCV--KFSMPRNVDMPVCGEDKIHCYDRAERE 433
            |.....|:.     |...|||.||...:.|..|.|.  .|..|.|  .|.|....:.|.  |...
  Fly   315 EEESEHFRTLEGQKYMLENCQAECQQRYLLRYCNCTVDLFYPPSN--YPACRLKDLPCL--AAHN 375

  Fly   434 LLVREFKRVKALNAG------RENSRSVESACNCMPACTSLVYNTEISQANFDLEEMLVAEGDTE 492
            .|::.|::     .|      ||.|..|   |.|:..|.||...|::.::               
  Fly   376 HLLQNFEQ-----PGEHPYVHREESGLV---CECLHNCKSLTLLTDMRKS--------------- 417

  Fly   493 FLKEYPGSQMSR-------LSIYFKQSQFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVEM 550
              .:.|..|.:.       |::|||:...:..|.:.:|...:.:.:.|||..|.:|.||:||:|.
  Fly   418 --VQQPWLQPNSSAIESMWLNVYFKKPSMLVYKTNLIYTWVDLIVSFGGICQLCLGCSIISLIEF 480

  Fly   551 IY 552
            ::
  Fly   481 VF 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 120/568 (21%)
ppk14NP_609017.2 ASC 45..483 CDD:279230 122/577 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - P PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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