DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rpk and ppk13

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster


Alignment Length:553 Identity:129/553 - (23%)
Similarity:225/553 - (40%) Gaps:119/553 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FITTYHEYCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYGCSTLIQSAYTKWTETPVIVSFA 96
            |.....||.:|:::||.:::.:::..:.|||||:...:.|.|....||:::.:.: |...|....
  Fly     3 FSRVIEEYLKNSTLHGARFIVDKDASWIERIFWVICLVASWYASWLLIKASLSAF-ENNAISFVV 66

  Fly    97 EKSTPVWNIPFPAVTVCSETKRV--LKQKGKETTYADLYSQFSEDMRASRVFRPENVSALEMEEF 159
            |.|...||..|||:.|| |:|.:  :::..::...||......|.:.....||.|:        :
  Fly    67 ESSFRDWNTNFPAIIVC-ESKNMDRIQEVAEQLWGADHDFTLEEVLSEIAFFRGES--------Y 122

  Fly   160 RTLLHVCNTQIIEEDIPLIAGDDLDYFDVLQR--MLPQFDRYFFYCRWLSRFGECETFFRKTLTE 222
            .| :|.|:.   ||........:..|:..|.|  .:.....    |.|.::..||..:|.:..||
  Fly   123 HT-VHECSG---EEVTASCFYSNFSYYAELVRSSCVDSISN----CEWNNKPFECCKYFHRMETE 179

  Fly   223 EGICYTFNGLRATEIYRDDTYQYQHSGE---PLEMENISSQHTAWTLETGYALDSDVETFPARVL 284
            .||||..|.::|.:........|.:.|.   .|:|| :.::.|.:.|.|        |..|..| 
  Fly   180 LGICYAINSMQAGKPKMPKLNMYSNRGSGPGALKME-LHTEATVFILGT--------EEVPTLV- 234

  Fly   285 SAGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIA 349
                           ..:.|:...||...|               |..:||:             
  Fly   235 ---------------TPKTDFLVVGPYISF---------------VRYISKR------------- 256

  Fly   350 VKPNMITMSSGIAEYHPVRRQCFLSHERSLRFFKVYTESNCQLECLANFTLTKCGCVKFSMPRNV 414
                .|.....|.:....:|.|..:.|..|...|.|:.|.|.::|..:..:..|.|.....|.:.
  Fly   257 ----DIENDEEIRQTSVHQRNCRFADENILDVHKFYSYSACTVQCRKDRQMELCNCSSHLSPNSP 317

  Fly   415 DMPVCGEDKIHCYDRAEREL--LVREFKRVKALNAGRENSRSVESACNCMPACTSLVYNTEISQA 477
            |..:|..:.:.|.:|...:|  ::.::.:::    ||:.     ..|:|:|:||.:...|.    
  Fly   318 DWQLCNMEGLECLNRNYEDLSVIIAKWSKLR----GRKG-----LVCDCLPSCTEVDITTV---- 369

  Fly   478 NFDLEEMLVAEGDTEFLKEYPGSQ--MSRLSIYFKQSQFITSKRSELYGMTEFLANCGGIFGLFM 540
             :|.:|.:.            |||  :||:.:...:......||:.:.|..:.:.:.||..|||:
  Fly   370 -YDSKENMA------------GSQNAISRIEVGLIELPTERYKRNLVRGKLDLVVSIGGTTGLFV 421

  Fly   541 GFSILSLVEMIYHFTLRLFT-------NLKRLV 566
            |.|:||.||:.|:.|:|.:|       .||||:
  Fly   422 GASLLSFVEIFYYITIRPYTTYINEKRRLKRLI 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 119/523 (23%)
ppk13NP_001014495.1 ASC 10..434 CDD:279230 119/524 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7217
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
65.870

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