DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and LOC3292064

DIOPT Version :10

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_061515772.1 Gene:LOC3292064 / 3292064 VectorBaseID:AGAMI1_000959 Length:541 Species:Anopheles gambiae


Alignment Length:464 Identity:107/464 - (23%)
Similarity:177/464 - (38%) Gaps:118/464 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SIHGVQYLGEQERPFRERIFWLFVFLISIYGCSTLIQSAYTKWTETPVIVSFAEKSTPVWNIPFP 108
            ::||:.|||:......||:|||.:.::|||....|...::.::.....:|:. ||....||...|
Mosquito    52 AVHGLAYLGKPLLHILERLFWLVLIVVSIYFSVVLSFVSWERYQSKSTVVAI-EKDHYYWNTSMP 115

  Fly   109 AVTVCSETKRVLK--------QKG--KETTYADLYSQFSEDMRASRVFRPENVSALEMEEFRTLL 163
            ::|:| ..||:.:        :.|  ||...|:|: .|.|.:..|.....||:.           
Mosquito   116 SLTIC-PLKRIYRPYLLNYCSKNGITKEEDQAELF-DFLESLANSTFINFENIK----------- 167

  Fly   164 HVCNTQIIEEDIPLIAGDDLD-YFDVLQRMLPQFDRYFF-YCRWLSRFGECE---------TFFR 217
            |               .|::| ..||||.....:.:..: ..|.|:|..:.|         .|.|
Mosquito   168 H---------------SDNVDSLLDVLQIQPENYMKIIYNLTRDLTRLDDTELRVRTQSNLEFLR 217

  Fly   218 --KTLTEEGICYTFNGLRATEIYRDDTYQYQHSGEPLEMENISSQHTAWTLETGYALDSDVETFP 280
              :||||.|||||.|...::.:    |.....:|..|.:::..|..|...:..|...|.|: |: 
Mosquito   218 THQTLTEYGICYTTNSFISSNL----TASLLLTGRELPLDDFYSTRTVHNVRYGNLFDGDI-TY- 276

  Fly   281 ARVLSAGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKE 345
                          :...|:..:......|.:...:.|:: .|.:...:....|.:.|.....||
Mosquito   277 --------------SFIGFEPPITIFYHSPYETLNIAKYQ-PLTNEAHEYETFSIEIVTTKDFKE 326

  Fly   346 VLIAVKPNMITMSSGIAEYHPVRRQCFLSHERSLRFFKVYTESNCQLECLANFTLTKCGCVKFSM 410
                    ..|:|         :|.|...:|.:|..:.:||:..|..||........|||:....
Mosquito   327 --------DTTIS---------QRGCRFHYESNLTHYSIYTKGICLQECRIQLAYKLCGCIPHFY 374

  Fly   411 PRNVDMP----VCG-EDKIHCYDRAERELLVREFKRVKALNAGRENSRSVESAC--NC------- 461
            | |.:.|    ||. :..|.|:.|.::  |..|||  :.:|    :.:.:...|  ||       
Mosquito   375 P-NPEGPRAKKVCHYKQLIKCFPRYQK--LFLEFK--QDIN----DKKGIPCYCEQNCVDSKVII 430

  Fly   462 -----MPAC 465
                 |.||
Mosquito   431 EHRQVMAAC 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:459966 107/464 (23%)
LOC3292064XP_061515772.1 None

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