DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and ppk28

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_573169.2 Gene:ppk28 / 32671 FlyBaseID:FBgn0030795 Length:606 Species:Drosophila melanogaster


Alignment Length:578 Identity:166/578 - (28%)
Similarity:259/578 - (44%) Gaps:104/578 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LTFRRRRKAGSVAC---------EGFI---------TTYHEYCRNTSIHGVQYLGEQERPFRERI 62
            ||..|||::||..|         |..|         ..|  |.:|:::||::|:.|:.....|||
  Fly     4 LTESRRRQSGSSGCKKDSESDDDENTICSRAAIKRSVVY--YLKNSTLHGLKYIAEESITIPERI 66

  Fly    63 FWLFVFLISIYGCSTLIQSAYTKWTETPVIVSFAEKSTPVWNIPFPAVTVCSETKRVLKQKGKET 127
            |:...|::.:......|.:.|.||:.:|:|:|.:.|.....|:||||:|:|:..:.:|       
  Fly    67 FFGLAFVLVVILSVFFISNVYVKWSASPIIISTSAKQKLTSNMPFPAITICNLNQALL------- 124

  Fly   128 TYADLYSQFSEDMRASRVFRPENVSALEMEEFRTLLHVCNTQIIEEDIPLIAGDDL-------DY 185
                           |:|.|....|.    .|..|:.:|:.          .||..       .|
  Fly   125 ---------------SKVDRIGRTST----NFSLLMGLCDQ----------GGDTTISYIGTWKY 160

  Fly   186 FD-VLQRMLPQFDRYFFYCRWLSRFGECETFFRKTLTEEGICYTFNGLRATEI---YRDDT-YQY 245
            |. :|..:....::...||.:.||..:|...|...||::|:|..||.|..:.:   |.||. .:.
  Fly   161 FKAILVDVAQPCEKMLLYCSFGSREEDCSWLFTSILTDDGLCCNFNALHPSYLIRNYSDDVRLET 225

  Fly   246 QHSGEPLEMENISSQHTAWTLETGYALDSDVETFPARVLSAGARSGIFLALQSFKQEVDYACRGP 310
            .|.....|:.:       ||.|.|||.:.....||......|.|.|:.:.|.:...|. |..:..
  Fly   226 AHPNTRYELID-------WTPEKGYARNLPEFYFPRTSGGTGIRMGLTVVLNASIAEY-YCTKSM 282

  Fly   311 VQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIAVKPNMITMSSGIAEYHPVRRQCFLSH 375
            ..|||      ||:|.|.::|:||.....:..|:|..|.::|........|.......|:|..|.
  Fly   283 SVGFK------VLVHNPAELPKVSNYGFVVTAGREARIPIEPVYEDALPTIRSIKKSVRRCLFSD 341

  Fly   376 ERSLRFFKVYTESNCQLECLANFTLTKCGCVKFSMPRNVD--MPVCGEDKIHCYDRAERELLVRE 438
            |..|.:::.|:..||:|||.|...|.:|.||.:.:|| :|  ..|||.:...|.||.:.|:    
  Fly   342 ENDLAYYRTYSRKNCELECEAKLLLRECSCVLYYLPR-IDPLARVCGPNDNQCTDRVQTEI---- 401

  Fly   439 FKRVKALNAGRENSRSVESACNCMPACTSLVYNTEISQANFDLEEMLVA-EGDTEFLKEYPGSQM 502
                       |:|.:..|..||.|.|..|.|...:|.|:...:....| |...|::...|.|..
  Fly   402 -----------ESSLTNLSCENCWPGCFELTYRATLSTASIVSDPRFQAGENLPEYIFHGPYSNA 455

  Fly   503 SRLSI---YFKQSQFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVEMIYHFTLR 557
            |.:||   |:..:.|.::.:||::|.||||:|.||:.||||||||.|::|:.::.|:|
  Fly   456 SEISILHFYYMTNIFRSTTKSEMFGFTEFLSNTGGLLGLFMGFSIFSVIEIFFYITVR 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 153/530 (29%)
ppk28NP_573169.2 ASC 43..509 CDD:279230 153/531 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456754
Domainoid 1 1.000 101 1.000 Domainoid score I6864
eggNOG 1 0.900 - - E1_KOG4294
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 102 1.000 Inparanoid score I4956
Isobase 1 0.950 - 0 Normalized mean entropy S7217
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D112386at6656
OrthoFinder 1 1.000 - - FOG0000867
OrthoInspector 1 1.000 - - otm24766
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - P PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
1211.750

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