DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and ppk22

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_733051.2 Gene:ppk22 / 318593 FlyBaseID:FBgn0051105 Length:561 Species:Drosophila melanogaster


Alignment Length:613 Identity:132/613 - (21%)
Similarity:236/613 - (38%) Gaps:150/613 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SSKGIDLTFRRRRKAGSVACEGFITTYHEYCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYG 74
            :|||     :|:...||..|    ....:..||.|:.|...|...:....:|:.||.|.:.:...
  Fly    24 NSKG-----KRKESLGSAFC----LDMADLVRNISLQGYNKLLSPDLTLGQRLIWLLVHMATTVS 79

  Fly    75 CSTLIQSAYTKWTETPVIVSFAEKSTPVWNIPFPAVTVCSETKRVLKQKGKETTYADLYSQFSED 139
            ...::...:.::.....:.:..:...||.|:|||||::| ...|:.:|         ...|::|:
  Fly    80 LIVVLSLTWEQFVAQSFVTNLKDPLFPVENVPFPAVSIC-PNNRISRQ---------AVIQYAEE 134

  Fly   140 MRA-SRVFRPENVSALEMEEFRTL-LHVCNTQIIEEDIPLIAGDDLD---------YFD---VLQ 190
            :|. |.|.||.......:..||.. .||  ..:::.|..:.....||         :||   :::
  Fly   135 LRLNSPVIRPVEYFLERLRFFREFYTHV--GVVVDTDDFITFQTFLDVFGTWNNETFFDTRRIMK 197

  Fly   191 RMLPQFDRYFFYCRWLSRFGEC--ETFFRKTLTEEGICYTFNGLRATEIYRDDTYQYQHSGEPLE 253
            .:.|:...:...|...:....|  :..|:.:||..|.|.|||                       
  Fly   198 MLTPRCQGFVLKCTVANVEVPCFSKDAFQDSLTMYGPCCTFN----------------------- 239

  Fly   254 MEN-ISSQHTAWTLETGYALDSDVETFPARVLSAGARSGIFLALQSFKQEVDYACRGPV---QGF 314
            ||| :..:|                 |..|:  |.:..|:.:.|..  ..|||.  .|:   .|:
  Fly   240 MENKLKKRH-----------------FKNRL--ASSELGLKVVLND--SHVDYF--APILNTNGY 281

  Fly   315 KVGKFENVLLHAPDDVPQV--SKQFVRIP-MGKEVLIAVKPNMITMSSGIAEYHPVRRQCFLS-- 374
                  .|::|..::...|  |......| .|::..|||...::.....:..:.|..|:|:..  
  Fly   282 ------IVMIHNAENYASVYSSNVLEMFPGQGEDSYIAVCARVVDTDDSLKSFSPFSRRCYFEYE 340

  Fly   375 -----HERSLRFFKV-YTESNCQLECLANFTLTKCGCVKFSMP----RNVDMPV-CGEDKIHCYD 428
                 ||:.:..:.: ||..||...|.....:..|.|:.|.||    .|:|..| |....:.|.:
  Fly   341 AQNPIHEQLMNTYSLSYTFPNCITRCRIRSIIALCRCLPFQMPLQLVENLDGVVYCTLGHVSCLN 405

  Fly   429 R---------AERELLVREFKRVKALNAGRENSRSVESA--C-NCMPACTSLVYNTEISQANFDL 481
            :         .||.:       |..|      .|.:|.|  | .|:|:|..:.|  |:|.:...:
  Fly   406 QYIFKWRNILTERHI-------VNGL------EREIEEALYCPQCLPSCRDVQY--EVSMSALPI 455

  Fly   482 EEMLVA-----EGDTEFLKEYPGSQMSRLSIYF--KQSQFITSKRSELYGMTEFLANCGGIFGLF 539
            :..|..     ..:|||     |:.:|.|.:||  ..:|:.....:..:  .|..:..|.|..:|
  Fly   456 DNYLATLKLDENNETEF-----GTDISVLRVYFGDPHAQYYIRLLNNTW--FEVFSTIGNIMSIF 513

  Fly   540 MGFSILSLVEMIYHFTLRLFTNLKRLVK 567
            :|||::::.|:::..|..::....|:|:
  Fly   514 VGFSMVAIFEILFFVTKYIYKGCNRMVE 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 122/567 (22%)
ppk22NP_733051.2 ASC 46..527 CDD:279230 122/566 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456695
Domainoid 1 1.000 108 1.000 Domainoid score I6420
eggNOG 1 0.900 - - E1_KOG4294
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
76.850

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