DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rpk and ppk3

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_726336.1 Gene:ppk3 / 246504 FlyBaseID:FBgn0050181 Length:535 Species:Drosophila melanogaster


Alignment Length:581 Identity:119/581 - (20%)
Similarity:207/581 - (35%) Gaps:206/581 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 CRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYGCSTLIQSAYTKWTETPVIVSFAEKSTPVWN 104
            |.|.|||           ..||:|||.|.:.|:.....|.:....::..:|.::| .::....||
  Fly    58 CVNRSIH-----------LLERLFWLAVVVSSVIAALVLSRLQLERYFSSPTVIS-VDRDYRGWN 110

  Fly   105 IPFPAVTVCSETKRVLKQKGKETTYADLYSQFSEDMRASRVFRPENVSALEMEEFRTLLHVCNTQ 169
            ...||||:|               |.|                  ::.:.:..|:  :..:.|..
  Fly   111 GSLPAVTLC---------------YYD------------------HIDSFKANEY--IQEMWNVS 140

  Fly   170 IIEED-----------IPLIAG--------------DDLDYFDVLQR-------MLPQFDRYFFY 202
            ||:||           :...||              |.:|.::::||       ::..||..|  
  Fly   141 IIDEDYFYFMDFLYAVVNATAGNYAELAKFAEDERFDQIDLYEMIQRVDRPFEQVISSFDAGF-- 203

  Fly   203 CRWLSRFGECETFFRKTLTEEGICYTFNGLRATEIYRDDTYQYQHSGEPLEMENISSQHTAWTLE 267
                      :...::.:||.|.||..|...:|.:          ||:|:..|.:...       
  Fly   204 ----------QVHVQRVMTERGACYAINSPMSTVL----------SGQPVAYELMPQP------- 241

  Fly   268 TGYALDSDVETFPARVLSAGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFEN--VL-LHAPDD 329
                                      |:.|..||:    |.     .::..:|:  || :|:|.:
  Fly   242 --------------------------LSCQYGKQQ----CY-----IRMDLYESTGVLDVHSPFE 271

  Fly   330 VPQVSKQFVRIPMGKEVLIAVKPNMITMSSGIAEYHPVRRQCFLSHERSLRFFKVYTESNCQLEC 394
            |.......|.:....|:..:.|......|..:.:....:|:|..::|.:.. .|:|::|.|...|
  Fly   272 VSATEANIVALHKSDEITASFKVLETVASKNLRQLSVAQRKCVFNNEETSN-LKIYSKSLCLARC 335

  Fly   395 LANFTLTKCGCVKFSMPRNVDMPVCGEDKIHCYDRAERELLVREFK-RVKALNAGRENSRSVESA 458
            .|...|..|.||.|..| .||.|.|......|         :.:|| .:.||:           .
  Fly   336 RAVMALEMCNCVPFFYP-YVDGPSCNPAGFEC---------LLDFKWPIWALH-----------I 379

  Fly   459 CNCMPACTSLVYNTE-ISQANFDL---EEMLVAEGDTEFLKEYPGSQMSRLSIYFKQSQF----- 514
            |.|...||.:.|..: :.::::.:   ||:..:|..|                    |.|     
  Fly   380 CKCPSTCTEIEYTMQTVKKSSWGVKNNEEVASSETAT--------------------SSFRWDLI 424

  Fly   515 ---ITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVEMIY----HFTLRLFTNLKRLVKG 568
               :..:|..:|...:.:.:.||:..||:|.|::.||||::    :..|.:|| |.||:.|
  Fly   425 PPKVRMRRDVVYSFEDLVVSFGGVLALFVGVSVMGLVEMVHVLVNNLLLDVFT-LLRLMLG 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 112/559 (20%)
ppk3NP_726336.1 ASC 59..464 CDD:279230 110/557 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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