DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and Scnn1g

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_035456.1 Gene:Scnn1g / 20278 MGIID:104695 Length:655 Species:Mus musculus


Alignment Length:627 Identity:126/627 - (20%)
Similarity:221/627 - (35%) Gaps:186/627 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 HEYCRNTSIHGVQYLGEQERPFRERIFWLFVFL----ISIYGCSTLIQSAYTKWTETPVIVSFAE 97
            |.||.||:.||.:.:.......| |:.|:...|    :.|:.|:.|:.|.||  ....:.|.|.:
Mouse    30 HWYCLNTNTHGCRRIVVSRGRLR-RLLWIAFTLTAVALIIWQCALLVFSFYT--VSVSIKVHFQK 91

  Fly    98 KSTPVWNIPFPAVTVC------------------SETKRVL-------------KQKGKE----- 126
                   :.|||||:|                  ||||:.|             .:|.:|     
Mouse    92 -------LDFPAVTICNINPYKYSAVSDLLTDLDSETKQALLSLYGVKDVLDSTPRKRREAGSMR 149

  Fly   127 TTYADLYSQF-----------SEDMRASRVF--RPENVSALEMEEFRTLLHVCNTQIIEEDIPLI 178
            :|:.....:|           :|..:|...|  |...:|...:.:...::||      .|...|:
Mouse   150 STWEGTPPRFLNLIPLLVFNENEKGKARDFFTGRKRKISGKIIHKASNVMHV------HESKKLV 208

  Fly   179 AGDDLDYFDVLQRMLPQFDRYFFYCRWLSRFGECETFFRKTLTEEGICYTF-NGLRATEIYRDDT 242
            .                    |..|.  :...:|.|            ||| :|:.|.:.:....
Mouse   209 G--------------------FQLCS--NDTSDCAT------------YTFSSGINAIQEWYKLH 239

  Fly   243 YQYQHSGEPLEMENISSQHTAWTLETGYALDS---DVETFP------------------ARVLS- 285
            |....:..||| :.|:..::|..|......|.   |...|.                  |.:|| 
Mouse   240 YMNIMAQVPLE-KKINMSYSAEELLVTCFFDGMSCDARNFTLFHHPMYGNCYTFNNRENATILST 303

  Fly   286 --AGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLI 348
              .|:..|:.:.|  :..|.:|   .|......|  ..||:|..::.|.:.      .:|.|:..
Mouse   304 SMGGSEYGLQVIL--YINEDEY---NPFLVSSTG--AKVLVHQQNEYPFIE------DVGTEIET 355

  Fly   349 AVKPNM---ITMSSGIAEYHPVRRQCFLSHERS-----LRFFKVYTESNCQLECLANFTLTKCGC 405
            |:..::   :|.|..::|.:   .||  :.:.|     ..:...|:...|...|.....:.||||
Mouse   356 AMSTSIGMHLTESFKLSEPY---SQC--TEDGSDVPVTNIYNAAYSLQICLYSCFQTKMVEKCGC 415

  Fly   406 VKFSMPRNVDMPVCGEDK----IHCYDRAERELLVREFKRVKALNAGRENSRSVESACN--CMPA 464
            .::|.|.......|...:    ::||.:. .:..|||                 |..|.  |..:
Mouse   416 AQYSQPLPPAANYCNYQQHPNWMYCYYQL-YQAFVRE-----------------ELGCQSVCKQS 462

  Fly   465 CTSLVYNTEISQANFDLE-------EMLVAEGDTEFLKEYPGSQMSRLSIYFKQSQFITSKRSEL 522
            |:...:....|.|.:..|       .:|..:...:..|:...:.:::|.|::|.....:...|..
Mouse   463 CSFKEWTLTTSLAQWPSEASEKWLLNVLTWDQSQQINKKLNKTDLAKLLIFYKDLNQRSIMESPA 527

  Fly   523 YGMTEFLANCGGIFGLFMGFSILSLVEMIYHFTLRLFTNLKR 564
            ..:...|:|.||..||:|..|::.::|:|..|.:..|:.:.|
Mouse   528 NSIEMLLSNFGGQLGLWMSCSVVCVIEIIEVFFIDFFSIIAR 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 121/611 (20%)
Scnn1gNP_035456.1 ENaC 24..636 CDD:273304 126/627 (20%)
deg-1 32..557 CDD:273309 121/611 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 582..636
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 108 1.000 Domainoid score I6420
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8693
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.720

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