DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and Scnn1b

DIOPT Version :10

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_035455.1 Gene:Scnn1b / 20277 MGIID:104696 Length:638 Species:Mus musculus


Alignment Length:645 Identity:137/645 - (21%)
Similarity:208/645 - (32%) Gaps:219/645 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 TYHE----YCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYGC---STLIQSAYTKWTETPVI 92
            ||.|    ||.||:.||.:.: ..|.|.::.:::|...|.:...|   ...||: |..| |..|.
Mouse    21 TYKELLVWYCNNTNTHGPKRI-ICEGPKKKAMWFLLTLLFACLVCWQWGVFIQT-YLSW-EVSVS 82

  Fly    93 VSFAEKSTPVWNIPFPAVTVC-------SETKRVLKQKGKETTYADLYSQFSEDMRA--SRVFRP 148
            :|...|:     :.|||||||       |:.|.:||         ||    .|.|.|  .::..|
Mouse    83 LSMGFKT-----MNFPAVTVCNSSPFQYSKVKHLLK---------DL----DELMEAVLEKILAP 129

  Fly   149 E---------------NVSALEMEEFRTLLH--------------------VCNTQIIEEDIPLI 178
            |               |.:.|.:.:.|...|                    .||.|..:..:.|.
Mouse   130 EASHSNTTRTLNFTIWNHTPLVLIDERNPDHPVVLNLFGDSHNSSNPAPGSTCNAQGCKVAMRLC 194

  Fly   179 AGDD--------------------LDYFDVLQRMLPQF--------DRYFFYCRWLSRFGECETF 215
            :.:.                    |...::..::|||.        ||....|    .|| .|..
Mouse   195 SANGTVCTLRNFTSATQAVTEWYILQATNIFSQVLPQDLVGMGYAPDRIILAC----LFG-TEPC 254

  Fly   216 FRKTLT-----EEGICYTFNGLRATEIYRDDTYQYQHSGEPLEMENISSQHTAWTLETGYALDSD 275
            ..:..|     :.|.||.||                                 |.:..       
Mouse   255 SHRNFTPIFYPDYGNCYIFN---------------------------------WGMTE------- 279

  Fly   276 VETFPARVLSAGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRI 340
             ||.|:  .:.|...|:.|.| ...|| ||.   |......|  ..::||.....|.:.::.:..
Mouse   280 -ETLPS--ANPGTEFGLKLIL-DIGQE-DYV---PFLASTAG--ARLMLHEQRTYPFIREEGIYA 334

  Fly   341 PMGKEVLIAVKPNMITMSSGIAEYHPVRRQCFL--SHERSLRFFKVYTES----NCQLECLANFT 399
            ..|.|..|.|..:.:....  ..|.|    |.:  |.......:.||..:    .|...|..:..
Mouse   335 MAGTETSIGVLVDKLQRKG--EPYSP----CTMNGSDVAIKNLYSVYNTTYSIQACLHSCFQDHM 393

  Fly   400 LTKCGCVKFSMP--------RNVDMPVCGEDKIHCYDRAERELLVREFKRVKALNAGRENSRSVE 456
            :..|.|..:..|        .|.|.|    |..:||...:..:..||                  
Mouse   394 IRNCSCGHYLYPLPEGEKYCNNRDFP----DWAYCYLNLQMSVTQRE------------------ 436

  Fly   457 SAC--NCMPACTSLVYNTEISQANFDLE-------EMLVAEGDTEFLKEYPGSQMSRLSIYFKQS 512
             .|  .|..:|....|...||.|::..|       .:|..|.|...........:.:|:|||::.
Mouse   437 -TCLSMCKESCNDTQYKMTISMADWPSEASEDWILHVLSQERDQSSNITLSRKGIVKLNIYFQEF 500

  Fly   513 QFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVE-------MIYHFTLRLFTNLKRL 565
            .:.|.:.|....:...|:|.||.||.:||.|:|.|:|       .|:...::|..:.|.|
Mouse   501 NYRTIEESPANNIVWLLSNLGGQFGFWMGGSVLCLIEFGEIIIDFIWITIIKLVASCKGL 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:459966 130/622 (21%)
Scnn1bNP_035455.1 ENaC 21..621 CDD:273304 137/645 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 594..620
PY motif, recruits WW domain-containing proteins and is thereby required for ubiquitination and inhibition of the channel by NEDD4 and NEDD4L. /evidence=ECO:0000250|UniProtKB:P51168 614..618
Blue background indicates that the domain is not in the aligned region.

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