DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and egas-2

DIOPT Version :10

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_507640.2 Gene:egas-2 / 190561 WormBaseID:WBGene00013487 Length:919 Species:Caenorhabditis elegans


Alignment Length:424 Identity:75/424 - (17%)
Similarity:139/424 - (32%) Gaps:134/424 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 TLLH--VCNTQIIEEDIPLIAG-------DDL-----DYFDVL----QRMLPQFDRYFFYCRWLS 207
            |||:  :.|...|::.:|.|.|       .||     |.|:.:    ||:..:.|.|    :|..
 Worm   586 TLLNDLMQNPSQIKDMVPFITGLLSDSERSDLSWDVGDLFNWIAFEDQRLDLENDIY----KWND 646

  Fly   208 RFGECETFFRKTLTEEGICYTFNGLRATEIYRDDTYQY------QHSGEPLEMENISSQHTAWTL 266
                         ...|.|:|||       ::|..:.|      :|.|....|:....::..|  
 Worm   647 -------------VVLGNCFTFN-------HQDQNFTYLMRRPGRHGGIQAFMKTRQDEYAPW-- 689

  Fly   267 ETGYALDSDVETFPARVLSAGARSGIFLALQS-----FKQEVDYACRGPVQGFKVGKFENVLLHA 326
                     .:|           :|:.:.:.:     |.:.|.|               |...:|
 Worm   690 ---------YDT-----------AGMLVFIHNREDYVFSESVRY---------------NAQPNA 719

  Fly   327 PDDVPQVSKQFVRIPMGKEVLIAVKPNMITMSSGIAEYHPVRRQCFLSHERSLRFFKVYTESNCQ 391
            ...:.....::.|:. |:......||:.:.     ..|:|                ..||...|.
 Worm   720 QSTINIFMTRYTRLG-GRYGKCVKKPSEVK-----NYYYP----------------GAYTTDGCL 762

  Fly   392 LECLANFTLTKCGCVKFSMPRNVDMPVCGEDKIHCYDRAERELLVREFKRVKALNAGRENSRSVE 456
            ..|..:....:|.|:....|:..:...|...:..|...|                :......|..
 Worm   763 RTCYQDRMQQECQCMDPRYPKAPNATSCQLSERSCVTEA----------------SDAAGDPSTW 811

  Fly   457 SACNCMPACTSLVYNTEISQANFDLEEMLVAEGDTEFL---KEYPGSQMSRLSIYFKQSQFITSK 518
            |:|.|...|::..|:...|:||| :...:..|..::..   ..|....|  :||...:..|....
 Worm   812 SSCVCPLPCSNQEYSVTWSKANF-VNMPITCEKSSDVATCQANYVDQLM--VSIVLPKLDFQIYA 873

  Fly   519 RSELYGMTEFLANCGGIFGLFMGFSILSLVEMIY 552
            .:......:||:..||..|:.||.::::.:|:::
 Worm   874 ETPAMDFNKFLSQLGGQLGVLMGINLVTFIEVVF 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:459966 75/422 (18%)
egas-2NP_507640.2 deg-1 <596..908 CDD:273309 71/414 (17%)

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