DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and egas-3

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_507638.2 Gene:egas-3 / 190557 WormBaseID:WBGene00013480 Length:921 Species:Caenorhabditis elegans


Alignment Length:346 Identity:66/346 - (19%)
Similarity:114/346 - (32%) Gaps:101/346 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 GICYTFNGLRATEIYRDDTYQY------QHSGEPLEMENISSQHTAWTLETGYALDSDVETFPAR 282
            |.|:|||       :||..:.|      :|.|....|:....::..|                  
 Worm   649 GNCFTFN-------HRDRNFTYLMRRPGRHGGIQAFMKTRQDEYAPW------------------ 688

  Fly   283 VLSAGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVL 347
                                .|.|.            .||.:|..||       :|   ..:.|.
 Worm   689 --------------------YDTAA------------INVFIHNRDD-------YV---FSESVR 711

  Fly   348 IAVKPN-MITMSSGIAEYHPV---RRQCFL--SHERSLRFFKVYTESNCQLECLANFTLTKCGCV 406
            ...:|| ..|::..:..|..:   ..:|..  |..::..:...||...|...|..:....:|.|:
 Worm   712 YNAQPNAQSTINIFMTRYTRLGGNYGKCIKKPSEVKNYYYPGAYTTDGCLRTCYQDRMKEECNCM 776

  Fly   407 KFSMPRNVDMPVCGEDKIHCYDRAERELLVREFKRVKALNAGRENSRSVESACNCMPACTSLVYN 471
            ....|:..:...|...:..|...|...             ||   ..|..|:|.|...|::..|:
 Worm   777 DPRYPQAPNSTSCQLSERSCVTEASEA-------------AG---DPSTWSSCVCPLPCSNQEYS 825

  Fly   472 TEISQANFDLEEMLVAEGDTEFL---KEYPGSQMSRLSIYFKQSQFITSKRSELYGMTEFLANCG 533
            ...|:||| :...:..|..::..   |:|....|  :||...|..|.....:......:||:..|
 Worm   826 VTWSKANF-VNLPITCEKSSDVATCQKQYKDQLM--VSIILPQLDFKIYAETPAMDFNKFLSQLG 887

  Fly   534 GIFGLFMGFSILSLVEMIYHF 554
            |..|:.||.::::.:|:::.|
 Worm   888 GQLGVLMGINVVTFIEVVFLF 908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 65/342 (19%)
egas-3NP_507638.2 ASC <649..907 CDD:279230 65/343 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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