Protein Alignment rpk and del-4

DIOPT Version :10

• Sequence 1: NP_001246909.1
• Gene: rpk / 40580
• FlyBaseID: FBgn0022981
• Length: 568
• Species: Drosophila melanogaster
• Sequence 2: NP_492230.2
• Gene: del-4 / 189033
• WormBaseID: WBGene00012116
• Length: 527
• Species: Caenorhabditis elegans
• Alignment Length: 561
• Identity: 102/561 - (18%)
• Similarity: 184/561 - (32%)
• Gaps: 157/561 - (27%)

  Fly    43 TSIHGVQYLGEQERPFRERIFWLFVFLIS----IYGCSTLIQSAYTKWTETPVIVSFAEKSTPVW 103
            ||.|||.::|.....:. |.||:.|.::|    |:...||:.:..:....|...:.|||::
 Worm    19 TSTHGVPHIGMANARWL-RAFWILVVVVSIALFIWQFITLLTNYLSFSVNTETTLQFAERT---- 78

  Fly   104 NIPFPAVTVC-------SETKRVLKQKGKETTYADLYSQFSEDMRASRVFRPENVSALEMEEFRT 161
               ||.||:|       ||||.|      :...:.|...::.|..:::...|.:::|...::...
 Worm    79 ---FPTVTICHLNPWKLSETKSV------DPDMSALIDAYNSDSSSAQFGLPASLTADRQQQASK 134

  Fly   162 LLHVCNTQIIEEDIPLIAGDDLDYFDVLQRMLPQFDRYFFYCRWLSR---FGECETFFRKTLTEE 223
            ...:.:.::.|:.....|  |:.|         .:|.....|.:.::   ..:...|:..:.
 Worm   135 WTLMYSERLNEKQYNDAA--DIAY---------SYDDMVVSCTYNAKTCNITDFNDFYNPSY--- 185

  Fly   224 GICYTFNGLRATEIYRDDTYQYQHSGEPL-----EMENISSQHTAWTLETGYALDSDVETFPARV 283
            |.|..||        .|..|....:| ||     .|......:..||..:|..:|
 Worm   186 GNCLQFN--------TDGMYSSSRAG-PLYGLRMVMRTDQDTYLPWTEASGVIID---------- 231

  Fly   284 LSAGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLI 348
                                                    :|..|::|.           .:|..
 Worm   232 ----------------------------------------IHMQDEIPY-----------PDVFG 245

  Fly   349 AVKPNMITMSSGIAEYHPVR-----RQCFLSHE-RSLRFFKVYTESNCQLECLANFTLTKCGCV- 406
            ...|.....|.|::.....|     ..|....: ::..:...||...|...|:....:..|||.
 Worm   246 YFAPPGTASSLGVSYVQTTRLSKPYGSCTTKTKLKTTHYTGTYTVEACFRSCMQEKIIASCGCYY 310

  Fly   407 -KFSMPRNVDMPVCGED------KIHCYDRAERELLVREFKRVKALNAGRENSRSVESACNCMPA 464
             .:|...|....|..::      .::|.|               .:|:.......|.:.|:|...
 Worm   311 PAYSHASNTTQYVSCDNGVQTLSNLNCVD---------------LINSADSTEFDVLTDCDCPQP 360

  Fly   465 CTSLVYNTEISQANFDLEEMLVAE-----------GDTEFLKEYPGSQMSRLSIYFKQSQFITSK 518
            |....|...:|.|.:..:..:..|           ...|...::..:....:.||:::..|....
 Worm   361 CEIDSYGVTVSTAQWPSDSYVPTECNPGGPSGPWDASGESCLDWYKANTILIEIYYERMNFQVLT 425

  Fly   519 RSELYGMTEFLANCGGIFGLFMGFSILSLVEMIYHFTLRLF 559
            .|..|....|:::.||..|||:|.||:|.:|.:....|..|
 Worm   426 ESPAYTFVNFISDVGGQVGLFLGMSIISAIEYLVLIFLVFF 466

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rpk	NP_001246909.1	ASC	39..552	CDD:459966	100/552 (18%)
del-4	NP_492230.2	deg-1	14..460	CDD:273309	100/553 (18%)