Protein Alignment rpk and acd-3

DIOPT Version :10

• Sequence 1: NP_001246909.1
• Gene: rpk / 40580
• FlyBaseID: FBgn0022981
• Length: 568
• Species: Drosophila melanogaster
• Sequence 2: NP_001257250.1
• Gene: acd-3 / 182963
• WormBaseID: WBGene00007775
• Length: 484
• Species: Caenorhabditis elegans
• Alignment Length: 565
• Identity: 98/565 - (17%)
• Similarity: 171/565 - (30%)
• Gaps: 244/565 - (43%)

  Fly    33 ITTYHEYCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYGCSTL--IQSAY-----------T 84
            :||||...|       .|..|   .:..||||..|    :..|.||  ||...           |
 Worm    36 LTTYHGMIR-------IYTSE---TWPSRIFWGVV----VVTCVTLFMIQGGVLLEFYNSHPTAT 86

  Fly    85 KWTETPVIVSFAEKSTPVWNIPFPAVTVC------SETKRVLKQKGKETTY--ADLYSQFSEDMR 141
            |..|..:..||           .|::::|      .:....|..:|.:..|  .|.:...|:.:
 Worm    87 KIDEYRLPTSF-----------LPSISICPYGFKTDDNLFYLITQGDKDVYIPPDYWKNSSKQL- 139

  Fly   142 ASRVFRPENVSALEMEEFRTLLHVCNTQIIEEDIPLIAGDDLDYFDVLQRMLPQFDRYFFYCRWL 206
                             .:.|.:.|.                   ||::.::...::...:|
 Worm   140 -----------------LKRLSYKCE-------------------DVVESIMINPNQIIDFC--- 165

  Fly   207 SRFGECETFFRKTLTEEGICYTFNGLRATE-------IYRDDTYQYQ---HSGEPLEMENISSQH 261
                   ...|..:||.|.|:||...|..|       :..|.|..|.   || |..|:...|:|
 Worm   166 -------ANSRTQITEIGKCFTFENWREFETNTLKIKLKSDFTKMYTAHIHS-EYYEVSRSSTQ- 221

  Fly   262 TAWTLETGYALDSDVETFPARVLSAGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHA 326
             ||                   |..|:.:.:     ||:.|..:
 Worm   222 -AW-------------------LKPGSHAKL-----SFRIEEQH--------------------- 240

  Fly   327 PDDVPQVSKQFVRIPMGKEVLIAVKPNMITMSSGIAEYHPVRRQCFLS-HERSLR---FFKVYTE 387
              ::||.:....::..|:          |....|..|      ||.:: :::|..   ||..:|.
 Worm   241 --NLPQNNWGTCKVQTGE----------IYNHLGCLE------QCLVAGYDQSCHCSPFFNRFTR 287

  Fly   388 SNCQLECLANFTLTKCGCVKFSMPRNVDMPVCGEDKIHCYDRAERELLVREFKRVKALNAGRENS 452
            .:|.::.|.|       |.|..
 Worm   288 FHCSIDELLN-------CPKLK------------------------------------------- 302

  Fly   453 RSVESACNCMPACTSLVYNTEISQANFDLEEMLVAEGDTEFLKEYPGSQMSRLSIYFKQSQFITS 517
               |..|:|...|.|         .|:.|:.:       ..||.  .|.:|.::.:...:...:.
 Worm   303 ---EVPCDCPMQCYS---------QNYVLQPV-------SLLKS--RSNISTVTFHLNSNLLRSH 346

  Fly   518 KRSELYGMTEFLANCGGIFGLFMGFSILSLVEMIYHFTLRLFTNL 562
            ::.:.:...:.::..||:.|||:|.|.::|:|:..:....:|..|
 Worm   347 QQYKRFKQIDLMSYIGGVMGLFLGMSCVTLLEVFIYLFKTIFGTL 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rpk	NP_001246909.1	ASC	39..552	CDD:459966	92/547 (17%)
acd-3	NP_001257250.1	ASC	33..382	CDD:459966	96/554 (17%)