Protein Alignment rpk and del-1

DIOPT Version :10

• Sequence 1: NP_001246909.1
• Gene: rpk / 40580
• FlyBaseID: FBgn0022981
• Length: 568
• Species: Drosophila melanogaster
• Sequence 2: NP_001355359.1
• Gene: del-1 / 181534
• WormBaseID: WBGene00000952
• Length: 694
• Species: Caenorhabditis elegans
• Alignment Length: 630
• Identity: 119/630 - (18%)
• Similarity: 203/630 - (32%)
• Gaps: 155/630 - (24%)

  Fly    38 EYCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYGCSTLIQSAYTKWTETPVIVSFAEKSTPV 102
            ::|..|:.|||..:..... :..|..|:.|.|:.|..|.........|:.....||:.   ....
 Worm    75 DFCEQTTFHGVNMIFTTSL-YWVRFLWVVVSLVCICLCMYSFSHVKDKYDRKEKIVNV---ELVF 135

  Fly   103 WNIPFPAVTVC--SETKRVLKQKGKETTYA-DLYSQ---FSEDMRASRVFRPENVSALEMEEFRT 161
            .:.||||:|||  :..|..|.:...|.:.. |.:.|   :|.|.....:......|..:...|:.
 Worm   136 ESAPFPAITVCNLNPFKNHLARSVPEISETLDAFHQAVVYSNDATMDELSGRGRRSLNDGPSFKY 200

  Fly   162 LLHVCNTQIIEEDIPLIAGDDLDYFDVLQRMLPQFDRYFFYCRWLSRFGECETFFRKTLTEEGIC 226
            |.:    :.:..|...:.|..   ..:.|...|:.......|.:....|.....:.....|:.||
 Worm   201 LQY----EPVYSDCSCVPGRQ---ECIAQTSAPRTLENACICNYDRHDGSAWPCYSAQTWEKSIC 258

  Fly   227 YTFNGL-------------------------------RATEIYRDDTYQYQHSGEPLEMENISSQ 260
            ...|.:                               |...|:.....:....|.||..|.:..
 Worm   259 PECNDIGFCNVPNTTGSGNIPCYCQLEMGYCVFQPESRVRRIWEFQGNKIPEKGSPLRKEYMEQ- 322

  Fly   261 HTAWTLETGYALDSD---VET-------------FPARVLSAGARSGIFLALQS----------- 298
                ..:.||...:|   :.|             .|.|..:.|......:.:.|
 Worm   323 ----LTQLGYGNMTDQVAITTQAKEKMILKMSGLHPQRRAALGYGKSELIKMCSFNGQQCNIDTE 383

  Fly   299 FKQEVDYA---C---------------RGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPM-GK 344
            ||..:|.:   |               .||..|.::..|.|    :.|.:|......|||.: ||
 Worm   384 FKLHIDPSFGNCYTFNANPEKKLASSRAGPSYGLRLMMFVN----SSDYLPTTEATGVRIAIHGK 444

  Fly   345 E------VLIAVKPNMITMSSGIA----------------EYHPVRRQCFLSHERSLRFFKVYTE 387
            |      ......|..:..|.||:                :.:|..|..:..::        |..
 Worm   445 EECPFPDTFGYSAPTGVISSFGISLRNINRLPQPYGNCLQKDNPQSRSIYKGYK--------YEP 501

  Fly   388 SNCQLECLANFTLTKCGCV--KFSMP--RNVDMPVCGEDKIHCYDRAERELLVREFKRVKALNAG 448
            ..|...|.....:.||||.  ::..|  |:..........::|        |..|..::..
 Worm   502 EGCFRSCYQYRIIAKCGCADPRYPKPWKRSAWCDSTNTTTLNC--------LTTEGAKLST---- 554

  Fly   449 RENSRSVESACNCMPACTSLVYNTEISQANFDLEEMLVA-EGDTEFLKEYPGSQMSRLSIYFKQS 512
            :||.:.    |.|:..|....|.|..|.|.:....:..: :..::....|.....:.:.||::|.
 Worm   555 KENQKH----CKCIQPCQQDQYTTTYSAAKWPSGSIQTSCDNHSKDCNSYLREHAAMIEIYYEQM 615

  Fly   513 QFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVEMIYHFTLR 557
            .:...:.||.|.....:|:.||..|||:|.||:|::|.:: |.:|
 Worm   616 SYEILRESESYSWFNLMADMGGQAGLFLGASIMSVIEFLF-FAVR 659

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rpk	NP_001246909.1	ASC	39..552	CDD:459966	117/622 (19%)
del-1	NP_001355359.1	deg-1	75..656	CDD:273309	117/625 (19%)