DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and egas-1

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001359624.1 Gene:egas-1 / 180219 WormBaseID:WBGene00013486 Length:922 Species:Caenorhabditis elegans


Alignment Length:531 Identity:98/531 - (18%)
Similarity:175/531 - (32%) Gaps:172/531 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 CSTLI------QSAYTKWTETPVIVSFAEKSTPVWNIPFPAVTVCSETKRVLK-QKGKETTYADL 132
            |||:|      :.:..||.:||                      |:....:.. .||..|.....
 Worm   511 CSTIIDLCVPYKDSTGKWIKTP----------------------CNSKDDMANCTKGINTLTCSC 553

  Fly   133 YSQFSEDMRASRVFRPENVSALEMEEFRTLLHVCNTQI-----IEEDIPLIAG-------DDL-- 183
            ..::::.:....:...:.:.|:......|::.:.|..:     |::.:|.|.|       .||  
 Worm   554 GDKWTDTLCDLNILIKDVLMAIYGYVDLTMISLLNDLMQNPSQIKDMVPFITGLLTDSERSDLSW 618

  Fly   184 ---DYFDVLQRMLPQFDRYFFYCRWLSRFGECETFFRKTLTEE---------GICYTFNGLRATE 236
               |.|:                 |::...:     |..|..:         |.|:|||      
 Worm   619 DAGDLFN-----------------WIAFEDQ-----RLDLNRDIHKWNDVVLGNCFTFN------ 655

  Fly   237 IYRDDTYQYQHSGEPLEMENISSQHTAWTLETGYALDSDVETFPARVLSAGARSGIFLALQSF-- 299
             :||..:.|                                    |:.|:|...||    |:|  
 Worm   656 -HRDRNFTY------------------------------------RLRSSGRHGGI----QAFMK 679

  Fly   300 KQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIAVKPN-MITMSSGIAE 363
            .::.:||........      ||.:|..||       :|   ..:.|....:|| ..||:..:..
 Worm   680 TRQDEYAPWYDTAAI------NVFIHNRDD-------YV---FSESVRYNAQPNAQSTMNIFMTR 728

  Fly   364 Y--------HPVRRQCFLSHERSLRFFKVYTESNCQLECLANFTLTKCGCVKFSMPRNVDMPVCG 420
            |        ..|::.   |..::..:...||...|...|..:....:|.|:.   ||....|   
 Worm   729 YTRLGGRYGKCVKKP---SEVKNYYYPGAYTTDGCLRTCYQDRMKQECNCMD---PRYPQAP--- 784

  Fly   421 EDKIHCYDRAERELLVREFKRVKALNAGRENSRSVESACNCMPACTSLVYNTEISQANF-DLEEM 484
             ..:.....:||..:      ..|..|..:.|:..:  |.|...|::..|:...|:||| :|..:
 Worm   785 -GNVTSCQLSERSCV------TVASEAAGDPSKWWD--CVCPLPCSNQEYSVTWSKANFVNLPII 840

  Fly   485 LVAEGDTEFLKEYPGSQMSRLSIYFKQSQFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVE 549
            .....|....|.:...|: .:||...|..|.....:......:||:..||..|:.||.::::.:|
 Worm   841 CGKSSDVSTCKAHYIDQL-MVSIVLPQLDFKIYAENPAMDFNKFLSQLGGQLGVLMGINLVTFIE 904

  Fly   550 MIYHFTLRLFT 560
            ::: ....|||
 Worm   905 VVF-LLFGLFT 914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 95/521 (18%)
egas-1NP_001359624.1 deg-1 <595..908 CDD:273309 80/417 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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