DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and del-10

DIOPT Version :10

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_495302.3 Gene:del-10 / 174069 WormBaseID:WBGene00020897 Length:1069 Species:Caenorhabditis elegans


Alignment Length:533 Identity:95/533 - (17%)
Similarity:172/533 - (32%) Gaps:176/533 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SDSELDSSKGIDLTFRRRRKAGSVACEG---FITTYHEYCRNTSIHGVQYLGEQERPFRERIFWL 65
            |.:.|.||.|..:|. ....:|.:..|.   |:..:.: ....::|.:.......|.....|...
 Worm    41 SRASLGSSMGRRITL-IETDSGVIEVESDKQFLDAFKD-ANMDAVHHLNAASPVTRGLWCMIIIA 103

  Fly    66 FVFLISIYGCSTLIQSAYTKWTETPVIVSFAEKSTPVWNIPFPAVTVCSETK---------RVLK 121
            ||.|:.:. |.:.|:...::...|.:...:..|      |.||.|.:|:..:         |::.
 Worm   104 FVILVLVQ-CYSQIKLYISEPVATNIEAEYPSK------ISFPTVAICNNNQFRLTYLTGGRIMN 161

  Fly   122 QKGKE------TTYADLYSQFSEDMRASRVFRPENVSALEMEEFRTLLHVCNTQIIEEDIPLIAG 180
            ::.|.      :|..|:.|.|...:|.|.                                    
 Worm   162 RRSKSISGSLLSTGHDVESVFDTVLRKSW------------------------------------ 190

  Fly   181 DDLDYFDVLQRMLPQFDRYFFYCRWLSRFGECETFFRKTLTEEGICYTFNGLRATEIYRDDTYQY 245
             |:|....|:.......|....|.|.:......:.|:...|..|:|:..|    |:.:  :.|:.
 Worm   191 -DMDAVKFLRSAAHWKSRMILGCTWPNGTSCKLSDFKAVWTTTGLCWAIN----TDPH--NPYEV 248

  Fly   246 QHSGEPLEMENISSQHTAWTLETGYALDSDVETFPARVLSAGARSGIFLALQSFKQEVDYAC--- 307
            ..|||                  |:.|         |:|         |.::|: :.|| ||   
 Worm   249 TGSGE------------------GHGL---------RLL---------LNVESY-ERVD-ACTKH 275

  Fly   308 --RGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIAVKPNMITMSSGIAEYHPVR-- 368
              ...:.|.|      :|::...|:|..|...|.:|.|..:.|..|....:..:|:   |.:.  
 Worm   276 FRTKTLPGLK------ILIYNQTDIPDSSMNGVNVPSGYSMDIPFKMQHRSKLTGV---HCIEEN 331

  Fly   369 ----------------RQCFLSHERSLRFFKVYTESNCQLECLANFTLTKCGCVKFSMPRNVDMP 417
                            |.|      :||.:....|::|.......:|         |...:|.|.
 Worm   332 DEQIEASTDFNNPENIRTC------TLRRYMTEVENSCHCTLRRAYT---------SNSTDVKMK 381

  Fly   418 VCGEDK-IHCYDRAERELLVREFKRVKALNAGRENSRSVESACNCMPACTSLVYNT--EISQANF 479
            .|..|: ..|..:|.:.:                  |...:|..|:|.|.|:.|..  ::::...
 Worm   382 ACNVDQYFGCAQKAMQRI------------------REEGTASTCLPPCKSIDYTAWQDMNRLPQ 428

  Fly   480 DLEEMLVAEGDTE 492
            :|...|:.|.:.:
 Worm   429 NLMPALIEEQEED 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:459966 86/495 (17%)
del-10NP_495302.3 ASC 83..419 CDD:459966 83/465 (18%)
ASC <759..849 CDD:459966
Blue background indicates that the domain is not in the aligned region.

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