DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and LOC1281572

DIOPT Version :10

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_061499536.1 Gene:LOC1281572 / 1281572 VectorBaseID:AGAMI1_009034 Length:653 Species:Anopheles gambiae


Alignment Length:590 Identity:159/590 - (26%)
Similarity:256/590 - (43%) Gaps:111/590 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DSSKGIDLTFRRRRKAGSVACEGFITTYHEYCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIY 73
            |..:.|.....|.|.:       |.....|||.||:|||::|:|.......||.::...||: :.
Mosquito    16 DKEQRIKAAINRERVS-------FTENLREYCLNTTIHGLKYIGTVSLTLCERAYFFLTFLV-VT 72

  Fly    74 GCST-LIQSAYTKWTETPVIVSFAEKSTPVWNIPFPAVTVCSETKRVLKQKGKETTYADLYSQFS 137
            .||. .|.:.|.||..:|:|:.....:|.:.||||||||:|:     :.|..:|           
Mosquito    73 ACSIYFISNVYIKWQSSPIIIGLNPIATHIRNIPFPAVTICN-----MNQLRRE----------- 121

  Fly   138 EDMRASRVFRPENVSALEMEEFRTLLHVCNTQIIEEDIPLIAGD--DLDY---FDVLQRML---- 193
                           |.|..|..||     .|.:.:.|..|.||  |..|   :..::|||    
Mosquito   122 ---------------AAERIEQNTL-----EQTVLQSICSIDGDFNDTQYEGKWSAVKRMLLSAT 166

  Fly   194 PQFDRYFFYCRWLSRFGECETFFRKTLTEEGICYTFNGLRATEIYRDDTYQYQHSGEPLEMENIS 258
            .........||:..:...|...|:...|:||:|.|||.|....::|:.|   ..|..|.|:.:.|
Mosquito   167 QPCSALLKACRYAKQPERCSEIFQSIFTDEGLCCTFNTLDTVYMFRNAT---APSIFPTEVGSSS 228

  Fly   259 SQH--TAWTLETGYALDSDVETFPARVLSAGARSGIFLALQSFKQEVDYACRGPVQ-GFKVGKFE 320
            .:.  ..||.|.|||.:....::|..:...|...|:.:.|.:  ...||.|..... |||     
Mosquito   229 GRFRPILWTPENGYAEEPSNASYPRFIAGPGVAMGLAMVLDA--NASDYFCSSTSSVGFK----- 286

  Fly   321 NVLLHAPDDVPQVSKQFVRIPMGKEVLIAVKPNMITMSSGIAEYHPVRRQCFLSHERSLRFFKVY 385
             ::.|:|.:.|:::.....||:|.|..|.:.|.:...:..|.:....:|||..:.|.:|.::.||
Mosquito   287 -IIFHSPSETPKITDYAQYIPVGTENRIIITPKINDAADQIRKVAQAQRQCVFASEANLSYYSVY 350

  Fly   386 TESNCQLECLANFTLTKCGCVKFSMPR-NVDMPVCGEDKIHCYDRAERELLVREFKRVKALNAGR 449
            :.:||:|||.|...|..||||.:.:|: ..|..:|......||::....:         |..|  
Mosquito   351 SRNNCELECEAKLILENCGCVLYYLPKLYEDTKICSRANARCYEQIRSSI---------AFTA-- 404

  Fly   450 ENSRSVESACNCMPACTSLVYNTEISQANFDLEEMLVAEGDTEFLKE--YPGSQMSRLSIYFKQS 512
                :...:|:|:|.|..:.|..:::.|...:....:.|...:.:|:  |....::.:.|:.|.:
Mosquito   405 ----NTSISCSCLPGCFEISYVPDLTTAELQVGRFGIRETLLDNVKDEVYAKENLALVYIFVKDT 465

  Fly   513 QFITSKRSELYGMTEFL-------------------------ANCGGIFGLFMGFSILSLVEMIY 552
            .:.:..:.||.|.|:||                         ||.||:.|||:||||:||:|:||
Mosquito   466 YYRSFTKGELVGFTDFLCNFYSSLVSLLALLICFLSLLPLFQANVGGLLGLFLGFSIISLIEVIY 530

  Fly   553 HFTLR 557
            ..|||
Mosquito   531 FVTLR 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:459966 148/553 (27%)
LOC1281572XP_061499536.1 None

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