DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and LOC1281540

DIOPT Version :10

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_061504780.1 Gene:LOC1281540 / 1281540 VectorBaseID:AGAMI1_011337 Length:557 Species:Anopheles gambiae


Alignment Length:545 Identity:122/545 - (22%)
Similarity:214/545 - (39%) Gaps:112/545 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 HGVQYLGEQERPFRERIFWLFVFLISIYGCSTLIQSAYTKWTETPVIVSFAEKSTPVWNIPFPAV 110
            |..:.|.:|:|...||:|||.:.::.......:|.||:.|:|..|:|.:..:...|:..:||||:
Mosquito    56 HCYRQLAQQDRSLSERLFWLLMLILEAATLIAIIISAWGKFTANPLITTLHDTIYPIVLVPFPAI 120

  Fly   111 TVCSETKRVLKQKGKETTYADLYSQFSEDMRASRV------------FRPENVSAL-EMEEFRTL 162
            ::|:..:  :.:.......|.|..:.:|...||..            |..||:..: .::||..|
Mosquito   121 SLCNNNR--ISRAAAVRYAAQLAGRDAERRNASYFLEQIALLGKLYDFDYENLHQMTRLQEFLDL 183

  Fly   163 LHVCNTQIIEEDIPLIAGDDLDYFDVLQRMLPQFDRYFFYCRWLSRFGECETFFRKTL-----TE 222
            ..|.|:..:           .:..:.|:::.|:.:.....|.|.|.  |.....|..:     |.
Mosquito   184 NDVSNSTGM-----------YNALETLEKLSPRCEDMLLRCFWKSI--ELPCMLRNDMIEVRRTP 235

  Fly   223 EGICYTFNGLRATEIYRDDTYQYQHSGEPLEMENISSQHTAWTLETGYALDSDVETFPARVLS-A 286
            .|.|.|||.:..||                                    |:::.. |:..|. .
Mosquito   236 YGFCCTFNFIGHTE------------------------------------DNEIHP-PSYFLDVT 263

  Fly   287 GARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQ-----VSKQFVRIPMGKEV 346
            |...|:.|.|.....:..|.....: ||      |:.:..|.:||.     |::|||.  :|.|.
Mosquito   264 GPEMGLVLLLNGSSNDYFYNLFNNI-GF------NLQIFNPHEVPDSTAGGVNEQFVH--LGTET 319

  Fly   347 LIAVKPNMITMSSGIAEYHPVRRQCFLSHERSLRFFKVYTESNCQLECLANFTLTKCGCVKFSMP 411
            .|.|....|.....:..|...:|||...:| .|::...|..|||...|.....:..|.||.|.||
Mosquito   320 FIRVDAITINSEPDVLRYSRQKRQCVFRNE-LLKYGANYGRSNCVAACRLRSVMALCECVPFYMP 383

  Fly   412 ------RNVDMPVCGEDKIHCYD--RAERELLVREFKRVKALNAGRENSRSVESAC-NCMPACTS 467
                  .:..:..|....|.|..  :.:...::.:..::..|....|.|    ..| .|:|:|::
Mosquito   384 TAGATASSKSVTTCNLQHIACLSKYKIKWSTVITDIVQIPGLEKEMEES----LYCPECLPSCSA 444

  Fly   468 LVYNTEISQANFDL-----EEMLVAEGDTEFLKEYPGSQMSRLSIYFKQSQFITSKRSELYGMTE 527
            ..|  :|:.:|..|     :...|..|....      :.::.:.|:|.|.:....|::..|...|
Mosquito   445 SKY--QITASNLPLVRSRRDGFSVTAGIDNV------ADVAVVRIFFGQPETWMYKQNVAYYWFE 501

  Fly   528 FLANCGGIFGLFMGFSILSLVEMIY 552
            ..:|.||:||:..|.|:::|:|::|
Mosquito   502 IFSNFGGMFGIMAGMSLITLMEVVY 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:459966 121/543 (22%)
LOC1281540XP_061504780.1 None

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