DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and LOC1281022

DIOPT Version :10

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_061512634.1 Gene:LOC1281022 / 1281022 VectorBaseID:AGAMI1_000336 Length:473 Species:Anopheles gambiae


Alignment Length:467 Identity:183/467 - (39%)
Similarity:259/467 - (55%) Gaps:61/467 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 FP--AVTVCSETKRVLKQKGKETTYADLYSQFSEDMRASRVFRPENVSALEMEEFRTLLHVC--- 166
            ||  .||:|.||| |.|:....||...||:    |....:....|.:..||     .||.||   
Mosquito     6 FPKLPVTICPETK-VRKKDLDFTTAYQLYN----DEELWQYMAKEQIDKLE-----ALLQVCDFS 60

  Fly   167 ------NTQIIEEDIPLIAGDDLDYFDVLQRMLPQFDRYFFYCRWLSRFGECETFFRKTLTEEGI 225
                  |....::.:||           ||||...|:..|..|.|..:..:|..||::||||.||
Mosquito    61 FGIEMNNESYADDVVPL-----------LQRMAIPFEDMFLLCGWREQVIDCRDFFKETLTEAGI 114

  Fly   226 CYTFNGLRATEIYRDDTYQYQHSGEPLEMENISSQHTAWTLETGYALDSDVETFPARVLSAGARS 290
            ||:||.|.|.::.|.|..   ||......||.||:.  |.::.||:..:..:|:|.|...||.|:
Mosquito   115 CYSFNSLAADDLMRRDQL---HSEYEYMAENQSSKQ--WNMDEGYSSRAGGDTYPRRAFGAGRRA 174

  Fly   291 GIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIAVKPNMI 355
            |:|:..:....::||.|....|||||.      ||:|...|::..:|.|||:.:||.::|:|.:.
Mosquito   175 GLFVITKVQISDMDYMCGNSFQGFKVH------LHSPVQYPRMVNEFFRIPLSQEVSVSVEPLLF 233

  Fly   356 TMSSGIAEYHPVRRQCFLSHERSLRFFKVYTESNCQLECLANFTLTKCGCVKFSMPRNVDMPVCG 420
            ..::.:..|.|.||.|:.:|||.||:||||::.||.:|||:|:||..||||.|.:||..|..:||
Mosquito   234 DTTANVRRYDPSRRLCYYNHERYLRYFKVYSKYNCDIECLSNYTLKTCGCVPFPLPRTKDDRICG 298

  Fly   421 EDKIHCYDRAERELLVREFKRVKALNAGRENSRSVESACNCMPACTSLVYNTEISQANFDLEEM- 484
            ..|..|.|.|..  ::.|...:..||    .|.:....|||:|:|.:|.||||||||.||..:: 
Mosquito   299 MGKASCADMALS--VLEEMDLLHELN----KSDNFLEHCNCLPSCNALFYNTEISQAMFDWRKLA 357

  Fly   485 ----LVAEGDTEFLKEYPGSQMSRLSIYFKQSQFITSKRSELYGMTEFLANCGGIFGLFMGFSIL 545
                |:|..|       ..:::|.||||||.|:||..|||||:|:::|||||||:.|||||.|||
Mosquito   358 ENIHLIAGVD-------DNTELSYLSIYFKVSRFIPIKRSELFGISDFLANCGGVLGLFMGVSIL 415

  Fly   546 SLVEMIYHFTLR 557
            |:||::|:.||:
Mosquito   416 SIVELVYYCTLK 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:459966 180/460 (39%)
LOC1281022XP_061512634.1 None

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