DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and LOC1281021

DIOPT Version :10

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_061512635.1 Gene:LOC1281021 / 1281021 VectorBaseID:AGAMI1_013331 Length:568 Species:Anopheles gambiae


Alignment Length:551 Identity:218/551 - (39%)
Similarity:327/551 - (59%) Gaps:57/551 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RRRRKAGSVACEGFITTYHEYCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYGCSTLIQSAY 83
            ||.|.||       :..:.:||.|:||||.:|.....|...|::||:.:.::|||||::||::.|
Mosquito    31 RRTRNAG-------LNIFRDYCGNSSIHGFKYFVGNGRTRAEKVFWIAMCVLSIYGCASLIETVY 88

  Fly    84 TKWTETPVIVSFAEKSTPVWNIPFPAVTVCSETKRVLKQKGKETTYADLYSQFSEDMRASRVFRP 148
            .|||.:||:|:||||.|||.:|||||||:|.    |.|.|.|...:..:|         ..:...
Mosquito    89 DKWTRSPVVVTFAEKPTPVHDIPFPAVTICP----VTKVKSKVLNFTTIY---------QHLVHG 140

  Fly   149 ENVSALEMEEFRTLLHVC----NTQIIEEDIPLIAGDDLDYFDVLQRMLPQFDRYFFYCRWLSRF 209
            .||:..:.:.|..::.||    |..::::..     || :...:||.|.|.|:..|..|.|..::
Mosquito   141 GNVTDEDYDRFLAMIQVCDFSFNKYLVKQQF-----DD-NLVHLLQEMAPPFEELFLMCIWRGKY 199

  Fly   210 GECETFFRKTLTEEGICYTFNGLRATEIYRDDTY--QYQHSGEPLEMENISSQHTAWTLETGYAL 272
            ..|...|..||||.|||||||||.|.:|.|.:.|  .::|.||....||       |::|.||..
Mosquito   200 VNCSDLFEPTLTERGICYTFNGLGADDILRKEEYHQDFEHLGEKRSSEN-------WSMEHGYRP 257

  Fly   273 DSDVETFPARVLSAGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQF 337
            :..::.:|.||.|.|:.:|:|:.|:|...::||.|....||::      ..||.|:..||:|.|.
Mosquito   258 NIGLKAYPRRVASPGSTAGLFVGLKSELSDMDYLCGNSFQGYQ------SQLHTPNQCPQISNQN 316

  Fly   338 VRIPMGKEVLIAVKPNMITMSSGIAEYHPVRRQCFLSHERSLRFFKVYTESNCQLECLANFTLTK 402
            :||||.:.:.::|.|.:||.|..:..|.|.:|.|:..|||.||||::||:.||:||||:||||..
Mosquito   317 IRIPMNQALTVSVDPLLITTSENVMSYSPEKRLCYYPHERYLRFFRLYTKGNCELECLSNFTLHM 381

  Fly   403 CGCVKFSMPRNVDMPVCGEDKIHCYDRAERELLVREFKRVKALNAGRENSRSVESACNCMPACTS 467
            ||||.|||||..::.:||..|:.|.:.||..|      :.:.|.:...:::.:..:|||:|||..
Mosquito   382 CGCVLFSMPRAANVHICGLAKLACCEEAESIL------QEQGLGSVDNSTKMLLQSCNCLPACIF 440

  Fly   468 LVYNTEISQANFDLEEMLVAEGDTEFL--KEYPGSQMSRLSIYFKQSQFITSKRSELYGMTEFLA 530
            |.|.|||||::||...:.    ||..:  ||...|::|.|::|:|::|||:.||::|:|:.:|:|
Mosquito   441 LKYKTEISQSHFDWRRLT----DTIHICEKELNNSELSSLAVYYKEAQFISIKRNQLFGLNDFIA 501

  Fly   531 NCGGIFGLFMGFSILSLVEMIYHFTLRLFTN 561
            |||||.|||||.|:||:|||:|.||::...|
Mosquito   502 NCGGILGLFMGVSLLSIVEMLYFFTMKPLIN 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:459966 209/520 (40%)
LOC1281021XP_061512635.1 None

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