DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and LOC1277603

DIOPT Version :10

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_061518577.1 Gene:LOC1277603 / 1277603 VectorBaseID:AGAMI1_003455 Length:489 Species:Anopheles gambiae


Alignment Length:223 Identity:43/223 - (19%)
Similarity:69/223 - (30%) Gaps:114/223 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VNCE-----------ICQKTSHGLHFGLETCRACAAFFRRTVVLNRKYKCIQKTG-----KCE-- 61
            |:||           |||:||.                      |.|.:  |::.     |.|  
Mosquito   167 VDCESTSPDHHAQRYICQRTSE----------------------NHKQQ--QRSNNYIWQKIENL 207

  Fly    62 ---IGAGG-------------EEKLCKFCRFKKCIDLGMTTENVRT--DFKDDSEDTSSQSPQST 108
               .|.||             |:::.|          ..|:..|::  .|.|..|:|||:..:|.
Mosquito   208 FSFFGIGGSPTPHNATIPNDYEDEVLK----------NETSATVKSTVKFSDSEEETSSEEEESV 262

  Fly   109 SS--------------------MEVTSSQQIVA--------------------KVRNRVEYYI-- 131
            |.                    .|...|.|||.                    |:.|::|..|  
Mosquito   263 SKTLAALPKIEGSGESTALKELQEPEGSGQIVEKKAIETTGDLVSGVDEEKLDKMINKMEEMIKS 327

  Fly   132 VNPKTQAPAML--IDVNAIIKESRAILE 157
            ::..|..||:|  ..|:.::.:...|::
Mosquito   328 IDDLTVPPAVLERTTVSTVVLKKEEIVK 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:459966 35/188 (19%)
LOC1277603XP_061518577.1 None

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