DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and LOC101731449

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_031747978.1 Gene:LOC101731449 / 101731449 -ID:- Length:534 Species:Xenopus tropicalis


Alignment Length:580 Identity:128/580 - (22%)
Similarity:212/580 - (36%) Gaps:160/580 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RNTSIHGVQYLGEQERPFRERIFWL----FVFLISIYGCSTLIQSAYTKWTETPVIVSFAEKSTP 101
            ::||.||:..:...:..|| |:.||    |....:::.|:.::.:.||..:...:::..:.|   
 Frog    36 QHTSAHGIPNIFRSKHWFR-RMVWLVFVSFALCCALWQCTQMVLTYYTYPSHEKIMLISSAK--- 96

  Fly   102 VWNIPFPAVTVCSETKRVLKQKGKETTYADLYSQFSEDMRASRVFRPENVSALEMEEFRTLLHVC 166
               :.|||||:|:.....|...|:..:.::....                |.|||...|...|..
 Frog    97 ---LKFPAVTICNLNSVRLSSLGRSFSMSNSLQD----------------SGLEMTHRRNRSHHM 142

  Fly   167 NTQIIEEDIPLIAGDDLDYFDVLQRMLP---------QFDRYFFYCRWLSRFGEC-ETFFRKTLT 221
            |......|..::.....:.|......||         |.:....:|.:..:  || .:||...:.
 Frog   143 NVTSDSVDENVLYASAFNKFASEFNQLPDEQKIEMGHQLEDMLIFCNFHGQ--ECNSSFFSGFIN 205

  Fly   222 EE-GICYTFNGLRATEIYRDDTYQYQHSGEPLEMENISSQHTAWTLETGYALDSDVETFPARVLS 285
            .: |.|||||..::.:|          .|..:.::                        |..:..
 Frog   206 YKFGNCYTFNSQKSVDI----------RGNQIRVD------------------------PLNITK 236

  Fly   286 AGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIAV 350
            ||...|:.|.|  |.|:::|     |:.........:|:|....:|....:.|.:|.|.|..|  
 Frog   237 AGFMYGLHLEL--FIQQIEY-----VRDMTHAAGIRLLVHDQAQMPFPEDEGVNVPPGAETEI-- 292

  Fly   351 KPNMITMSSGIAEYHPVR-RQCFLSH----ERSLRFFK-----VYTESNCQLECLANFTLTKCGC 405
                     |:.:.|..| |..:.||    |....|:|     .||...|:..|.....:..|||
 Frog   293 ---------GMMKVHINRLRAPYGSHCTQGEGIKNFYKDIYGAGYTREACKRTCAQQSIMDNCGC 348

  Fly   406 V--KFSMPRNVDMPVCG------EDKIHCYDRAERELLVREFKRVKALNAGRENSRSVESACNCM 462
            .  :|:.|:..:.|.|.      .|.:..|          |||....           |..|:|.
 Frog   349 THWEFAFPKEGNYPKCNVSNAAIRDCVKLY----------EFKFAHD-----------ELNCHCP 392

  Fly   463 PACTSLVYNTEISQANFDLEEMLVAEGDTEFLKEYPGSQMS--------------RLSIYFKQSQ 513
            ..|:..:|...:|.:.:.....:  |..:..|||. |.||.              ::.:||||..
 Frog   393 LQCSEDLYELTVSGSQWPSTAFI--ENFSRELKEM-GGQMRDIADSPSMIRDNFVKVVVYFKQLN 454

  Fly   514 FITSKRSELY----GMTE--FLANCGGIFGLFMGFSILSLVEMIYHFTLRLFTNLKRLVK 567
            |      ||.    .|||  .::|.||:.||::|||:.:|.|....|...||..::|.:|
 Frog   455 F------ELIEEEPSMTEINLISNMGGLVGLWVGFSVCTLAEFFELFLDVLFYFVQRCLK 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 123/563 (22%)
LOC101731449XP_031747978.1 ASC 35..494 CDD:395688 123/564 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48391
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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