DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and LOC101731449

DIOPT Version :10

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_031747978.1 Gene:LOC101731449 / 101731449 XenbaseID:XB-GENE-29085359 Length:534 Species:Xenopus tropicalis


Alignment Length:580 Identity:128/580 - (22%)
Similarity:212/580 - (36%) Gaps:160/580 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RNTSIHGVQYLGEQERPFRERIFWL----FVFLISIYGCSTLIQSAYTKWTETPVIVSFAEKSTP 101
            ::||.||:..:...:..|| |:.||    |....:::.|:.::.:.||..:...:::..:.|   
 Frog    36 QHTSAHGIPNIFRSKHWFR-RMVWLVFVSFALCCALWQCTQMVLTYYTYPSHEKIMLISSAK--- 96

  Fly   102 VWNIPFPAVTVCSETKRVLKQKGKETTYADLYSQFSEDMRASRVFRPENVSALEMEEFRTLLHVC 166
               :.|||||:|:.....|...|:..:.::....                |.|||...|...|..
 Frog    97 ---LKFPAVTICNLNSVRLSSLGRSFSMSNSLQD----------------SGLEMTHRRNRSHHM 142

  Fly   167 NTQIIEEDIPLIAGDDLDYFDVLQRMLP---------QFDRYFFYCRWLSRFGEC-ETFFRKTLT 221
            |......|..::.....:.|......||         |.:....:|.:..:  || .:||...:.
 Frog   143 NVTSDSVDENVLYASAFNKFASEFNQLPDEQKIEMGHQLEDMLIFCNFHGQ--ECNSSFFSGFIN 205

  Fly   222 EE-GICYTFNGLRATEIYRDDTYQYQHSGEPLEMENISSQHTAWTLETGYALDSDVETFPARVLS 285
            .: |.|||||..::.:|          .|..:.::                        |..:..
 Frog   206 YKFGNCYTFNSQKSVDI----------RGNQIRVD------------------------PLNITK 236

  Fly   286 AGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIAV 350
            ||...|:.|.|  |.|:::|     |:.........:|:|....:|....:.|.:|.|.|..|  
 Frog   237 AGFMYGLHLEL--FIQQIEY-----VRDMTHAAGIRLLVHDQAQMPFPEDEGVNVPPGAETEI-- 292

  Fly   351 KPNMITMSSGIAEYHPVR-RQCFLSH----ERSLRFFK-----VYTESNCQLECLANFTLTKCGC 405
                     |:.:.|..| |..:.||    |....|:|     .||...|:..|.....:..|||
 Frog   293 ---------GMMKVHINRLRAPYGSHCTQGEGIKNFYKDIYGAGYTREACKRTCAQQSIMDNCGC 348

  Fly   406 V--KFSMPRNVDMPVCG------EDKIHCYDRAERELLVREFKRVKALNAGRENSRSVESACNCM 462
            .  :|:.|:..:.|.|.      .|.:..|          |||....           |..|:|.
 Frog   349 THWEFAFPKEGNYPKCNVSNAAIRDCVKLY----------EFKFAHD-----------ELNCHCP 392

  Fly   463 PACTSLVYNTEISQANFDLEEMLVAEGDTEFLKEYPGSQMS--------------RLSIYFKQSQ 513
            ..|:..:|...:|.:.:.....:  |..:..|||. |.||.              ::.:||||..
 Frog   393 LQCSEDLYELTVSGSQWPSTAFI--ENFSRELKEM-GGQMRDIADSPSMIRDNFVKVVVYFKQLN 454

  Fly   514 FITSKRSELY----GMTE--FLANCGGIFGLFMGFSILSLVEMIYHFTLRLFTNLKRLVK 567
            |      ||.    .|||  .::|.||:.||::|||:.:|.|....|...||..::|.:|
 Frog   455 F------ELIEEEPSMTEINLISNMGGLVGLWVGFSVCTLAEFFELFLDVLFYFVQRCLK 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:459966 123/563 (22%)
LOC101731449XP_031747978.1 ASC 35..494 CDD:459966 123/564 (22%)

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