DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and LOC100497753

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_002938659.3 Gene:LOC100497753 / 100497753 -ID:- Length:553 Species:Xenopus tropicalis


Alignment Length:620 Identity:131/620 - (21%)
Similarity:208/620 - (33%) Gaps:194/620 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VACEGFITTY-------HEYCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYGCSTLIQSAYT 84
            |..||:|..|       ..:|.||:|||...|....:...:..|||.:|.:|.         |..
 Frog     7 VKTEGWIEYYGSFEEMFQYFCDNTTIHGTIRLNCSRKNKMKTAFWLVIFFLSF---------AMM 62

  Fly    85 KWTETPVIVSFAEKSTPVWNIP-------------FPAVTVCS-------ETKRVLKQKGK---E 126
            .|       .|....|..|:.|             |||||:|:       :....|.|..|   |
 Frog    63 YW-------QFGIMVTQYWSYPISTTVTVQSKGNKFPAVTICNLNPFRFDQVNTYLNQLDKLAQE 120

  Fly   127 TTYADLYSQFSED-MRASRVFRPENVSALEMEEFRTLLHVCNTQIIEEDIPLIAGDDLDYFDVLQ 190
            |    |||.::.| ::|.:       ..:.:::|   ||....|.....|       ||...|||
 Frog   121 T----LYSLYNYDGLKAKQ-------QVIHLQDF---LHNVTNQFNGSFI-------LDQSIVLQ 164

  Fly   191 RM--------LPQFDRYFFYCRWLSRFGECETF---FRKTLTEEGICY---TFNGLRATEIYRDD 241
            ::        ||               || :||   |:...:..|.||   .::|:.|..    :
 Frog   165 KLQENGSGPALP---------------GE-KTFQVGFKLCNSSGGDCYYKSYWSGVDALH----E 209

  Fly   242 TYQYQH----SGEPLEMENISSQHTAWTLETGYALDSDVETFPARVLS----------------- 285
            .||:.:    |..| .:.|||...    |...:....|....|..:..                 
 Frog   210 WYQFHYINIMSKIP-PVLNISGDE----LGKNFIFSCDFIQKPCTLREYKFFHHPIYGSCFTVTP 269

  Fly   286 -----------AGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVR 339
                       ||.:.|:     |.|.:||.....|:.....|  ..:::|.|:..|:|..|...
 Frog   270 QGKENALYSPRAGKKYGL-----SLKMKVDQKHNMPLLSQAAG--ARIMIHNPNQPPRVEHQGFD 327

  Fly   340 IPMGKEVLIAVKPNMITMSSGIAEYHPVRRQCFLSHER---SLRFFKVYTESNCQLECLANFTLT 401
            |..|.|..|.||.:.:....|  :|.|    |......   .|.:...||...|...|.......
 Frog   328 IRPGTETSIGVKQDEVRHLGG--KYGP----CASDGNNLGLKLLYSTSYTLQACLNSCFQYKMTE 386

  Fly   402 KCGCVKFSMPRNVDMPVCGEDKI----HCYDRAERELLVREFKRVKALNAGRENSRSVESAC--N 460
            .|||..:..|.......|..:|.    ||:.:...::|.....                  |  .
 Frog   387 TCGCGYYFYPLPPGTEYCNYNKHPGWGHCFYQLYEKMLDHRHH------------------CFTQ 433

  Fly   461 CMPACTSLVYNTEISQANF---DLEEMLVAEGDTEFLKEYPG-------SQMSRLSIYFKQSQFI 515
            |...||...|......|.:   ..:..::     ..|..:.|       |.:|::::|:::..:.
 Frog   434 CPMQCTKTRYQLSAGTAQWPSPTSKTWII-----PLLTRHKGYNRTSKRSDISKINVYYEELSYQ 493

  Fly   516 TSKRSELYGMTEFLANCGGIFGLFMGFSILSLVEM 550
            :.:.:....:|..|:|.||.:..:.|.|:||:||:
 Frog   494 SVEETPAMPVTLLLSNMGGQWSWWFGSSVLSVVEI 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 126/601 (21%)
LOC100497753XP_002938659.3 ENaC 18..551 CDD:273304 126/609 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 117 1.000 Domainoid score I5830
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I4647
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48391
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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