DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and scnn1g

DIOPT Version :10

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_031749443.1 Gene:scnn1g / 100487822 XenbaseID:XB-GENE-980897 Length:672 Species:Xenopus tropicalis


Alignment Length:677 Identity:128/677 - (18%)
Similarity:224/677 - (33%) Gaps:236/677 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DSELDSSKGIDLTFRRRRK---AGSVACEGFITTYHE----YCRNTSIHGVQYLGEQERPFRERI 62
            |..:.|..|..||.:.::.   .|..|     .|.:|    ||.||:.||.:.:...:...| |.
 Frog     7 DRSVMSKSGKKLTQKLKKNLPVTGPQA-----PTLYELMQWYCLNTNTHGCRRIVVSKGRLR-RW 65

  Fly    63 FWLFVFLISI----YGCSTLIQSAYTKWTETPVIVSFAEKSTPVWNIPFPAVTVCS--------- 114
            .|:.:.|.::    :.|:.|:.|.|:  ....:.|:|.:       :.|||||:|:         
 Frog    66 IWIVLTLCAVALIFWQCALLLMSYYS--VSASITVTFQK-------LVFPAVTICNLNPYSYSKI 121

  Fly   115 ---------ETKRVLKQ-------------------------------------KGKETTYADLY 133
                     ||.:.||.                                     :|.:...:||.
 Frog   122 KDRLSALERETSQTLKNIYGFTEPLVRSKRDVEVDENSTDIFIKQIPLYRLESVQGNQLVVSDLK 186

  Fly   134 SQFSEDMRASRVFR------------------PEN------------VSALEMEEFRTLLHVCN- 167
            ::....|.|..:.|                  |.|            |:|:: |.:|  ||..| 
 Frog   187 TKKRTRMSAKVIHRDAESVQDPGNMVGFKLCDPNNSSDCTIFTFSSGVNAIQ-EWYR--LHYTNV 248

  Fly   168 -TQIIEEDIPLIAGDDLD------YFDVLQRMLPQFDRYFFYCRWLSRFGECE----TFFRKTLT 221
             .:|..|| .:..|...|      :||.|                     .|:    |.|...| 
 Frog   249 LAKISMED-KIAMGYKADELIVTCFFDGL---------------------SCDARNFTLFHHPL- 290

  Fly   222 EEGICYTFNGLRATEIYRDDTYQYQHSGEPLEMENISSQHTAWTLETGYALDSDVETFPARVLSA 286
             .|.|||||                                  :.|.|..|.|.:         .
 Frog   291 -YGNCYTFN----------------------------------SAERGNLLVSSM---------G 311

  Fly   287 GARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIAVK 351
            ||..|:.:.|  :..|.:|   .|......|  ..:|:|..|:.|.:......:....|..|.::
 Frog   312 GAEYGLKVVL--YIDEDEY---NPYLSTAAG--AKILVHDQDEYPFIEDLGTELETATETSIGMQ 369

  Fly   352 PNMITMSSGIAEYHPVRRQCFL-SHERSLR--FFKVYTESNCQLECLANFTLTKCGCVKFSMPRN 413
               :|.|:.:::.:   ..|.: ..:.|:.  :.|.||...|...|.....:..|||..:..|..
 Frog   370 ---LTESTKLSDPY---SDCTMDGSDVSVENLYSKKYTLQICLNSCFQREMVRTCGCAHYDQPLP 428

  Fly   414 VDMPVCGEDK----IHCYDRAERELLVREFKRVKALNAGRENSRSVESACNCMPACTSLVYNTEI 474
            .....|..::    |:||.:..::.:..|.              ..:|||.  .:|:...:....
 Frog   429 NGAKYCNYEEYPSWIYCYFKLYKQFVQEEL--------------GCQSACR--ESCSFKEWTLTR 477

  Fly   475 SQANFD-------LEEMLVAEGDTEFLKEYPGSQMSRLSIYFKQSQFITSKRSELYGMTEFLANC 532
            |.|.:.       :..:|..|...:..|....:.::.|:|:::.....:...|..|.:...|:|.
 Frog   478 SLAKWPSLNSEQWMLRVLSWELGEKLNKNLTKNDLANLNIFYQDLNSRSISESPTYNIVTLLSNF 542

  Fly   533 GGIFGLFMGFSILSLVEMIYHFTLRLF 559
            ||..||:|..|::.::|::..|.:..|
 Frog   543 GGQLGLWMSCSMICVLEIVEVFFIDSF 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:459966 117/627 (19%)
scnn1gXP_031749443.1 ENaC 35..651 CDD:273304 121/644 (19%)

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