DRSC/TRiP Functional Genomics Resources

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Protein Alignment runx2b and RunxA

DIOPT Version :9

Sequence 1:NP_998027.2 Gene:runx2b / 405788 ZFINID:ZDB-GENE-040629-4 Length:464 Species:Danio rerio
Sequence 2:NP_001259747.1 Gene:RunxA / 4379817 FlyBaseID:FBgn0083981 Length:663 Species:Drosophila melanogaster


Alignment Length:394 Identity:150/394 - (38%)
Similarity:194/394 - (49%) Gaps:91/394 - (23%)


- Green bases have known domain annotations that are detailed below.


Zfish    62 RSMAEIIADHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENY 126
            |::.:.:.:||.||:||.||.|:|:|||.|||.|||||||||||:||::.|||:|||.|||||||
  Fly    86 RTLGDFLTEHPGELIRTSSPLFVCTVLPPHWRSNKTLPVAFKVVSLGDIMDGTMVTVRAGNDENY 150

Zfish   127 SAELRNASGVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREPRR 191
            .|||||.:.|||||||:||||||||||||||||||||||.||||.:|||::|||||||||||||.
  Fly   151 CAELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTITVSTNPPHIATYNKAIKVTVDGPREPRS 215

Zfish   192 HRPKLDDSPKAGLFSDRLSELERIRQTTMRVTVPTQTPRPSLSSPNS---YTPQGQTQITDPRQA 253
                          ...||.|.:.:|.....   .|.|....:.|.|   ..|.|..      |:
  Fly   216 --------------KTMLSLLGQQQQFHFAF---GQRPFHFSTDPLSGFRMPPIGNC------QS 257

Zfish   254 QSSPPWSYDQTYPSYLSPMASPSVHS-TTPLSSSRATGLPSISDVPRRLPGSTDLSPFPGQFERQ 317
            .|:..|.|.....:|...:||..:.| |||                                   
  Fly   258 ASNTHWGYGSAASAYSPYLASSGLSSCTTP----------------------------------- 287

Zfish   318 FPAFSSLTESRFSSPRMHYPATFTYTPTPVTTGMSLGSAHYHTYLPPPYPGSTQSQSGPFQSSST 382
                   |.::|::|.:    .||.:....:.....|.|.....: |..|.||.|......||  
  Fly   288 -------TSAQFNNPAL----GFTCSSNDQSNNQDFGGATNRDCV-PMLPDSTASDLDQHLSS-- 338

Zfish   383 PYLYYGASSG--SYQFSMVPGGERSPTRMMPPCT---SASTGTSLVNPNLPVQADGSGGVEGDGS 442
               ..|::||  ::...:..||:.|.:..:...:   ||..||:       ....||||..|.|:
  Fly   339 ---LVGSTSGQMTHHSLLGAGGQTSISSTVNGASGGGSAGAGTA-------GGGAGSGGGAGGGA 393

Zfish   443 HSNS 446
            ..||
  Fly   394 GGNS 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
runx2bNP_998027.2 Runt 71..192 CDD:279225 96/120 (80%)
RunxI 370..464 CDD:285676 22/82 (27%)
RunxANP_001259747.1 Runt 95..216 CDD:279225 96/134 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 211 1.000 Domainoid score I2735
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 1 1.000 - - mtm6398
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.100

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