DRSC/TRiP Functional Genomics Resources

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Protein Alignment slx1 and slx-1

DIOPT Version :10

Sequence 1:NP_649484.3 Gene:slx1 / 40578 FlyBaseID:FBgn0037263 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_491541.1 Gene:slx-1 / 172157 WormBaseID:WBGene00018909 Length:443 Species:Caenorhabditis elegans


Alignment Length:276 Identity:101/276 - (36%)
Similarity:147/276 - (53%) Gaps:25/276 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QQEESVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCDFGGARKTSRKGPWL 76
            ::|:...::..|||||.|.|:|..|.|:.:||:|:||:|.|||.|||.|.|.|||:||..:|||.
 Worm   161 RKEKIEEVQNEFYGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRDKGGAKKTDSRGPWD 225

  Fly    77 MVMIVHGFPNNTVALQFEWAWQQPSLSTRLKMYPELKRKLPRETFFDYNFRILSNMLGVGPWNRL 141
            ||.:||||||:..||.||||||.|.:|..||  .:..||..:||.|.:..||...::....:.|.
 Worm   226 MVCVVHGFPNHVAALHFEWAWQNPLVSKSLK--EKQLRKERKETPFAFQLRIACELMNSSAFCRF 288

  Fly   142 PLTVRWLETDYERPF--SKALPKHMEIVSGKV----SISASQRRRPDDAVPPPPVAWASECHLCM 200
            .||.|||.|..|.||  |...|.|.::..|||    |:..|:|   :|.:.      ..||.:|.
 Worm   289 ALTFRWLITTEELPFPTSCVPPDHTKLRFGKVKKEMSLVPSKR---EDYLE------MGECRICG 344

  Fly   201 QEMEQPEKSRLGCTNQMCRLTCHMVCLAN---YLLGDEPGHYIPVGGECPLCETRLSWAALLQRK 262
            :::|: ..|.:.|.:..|....|..||:.   .|..:...|..|:...||.|.....|..:::.:
 Worm   345 KDIEK-LWSLVRCISATCPSHFHSKCLSENGLKLKNEHVDHVYPLKANCPTCGQFYLWGDIIREQ 408

  Fly   263 RLLLGV----PEELQD 274
            |.::.:    .||.|:
 Worm   409 RRIIKISTKCAEEFQN 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slx1NP_649484.3 GIY-YIG_SLX1 23..101 CDD:198402 48/77 (62%)
slx-1NP_491541.1 GIY-YIG_SLX1 172..249 CDD:198402 48/76 (63%)

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