DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9775 and chtop

DIOPT Version :9

Sequence 1:NP_001262257.1 Gene:CG9775 / 40576 FlyBaseID:FBgn0037261 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001011274.1 Gene:chtop / 496726 XenbaseID:XB-GENE-997791 Length:241 Species:Xenopus tropicalis


Alignment Length:418 Identity:92/418 - (22%)
Similarity:123/418 - (29%) Gaps:210/418 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TGISLNERFTQM-QSKQPPQGRGRSRSRSRSRRIVSSGAGNQGMSAVNSRLLNEFKRLHTVQTAL 66
            |.:|||||||.| ::|||.....|:..:.:...          .||.|.||..:.:...:||.||
 Frog    15 TKLSLNERFTNMLKNKQPMPVNIRATMQQQQHM----------ASAKNRRLAQQMENRPSVQAAL 69

  Fly    67 KLKRRSLRTTAVSGRGPRVAGVKSLRLAPNGKPIRSNNVTRVATMRADLVASGNAARNRRSGSSM 131
            ||| :||:        .|:.  ||...|..|:|:                           |..:
 Frog    70 KLK-QSLK--------QRLG--KSNIQARLGRPV---------------------------GGLV 96

  Fly   132 RNVPATNGGGGGLRQRLGQRRPSVGGAAERVERRQRQQQQAPRGRSRSQSRSRHPQIQRVDRARS 196
            |......|.|.|||           ||       ||...:..||                     
 Frog    97 RGAIGMRGAGMGLR-----------GA-------QRGMMRIGRG--------------------- 122

  Fly   197 QSRGRSIGRSQSRNRDRSAQGRVPVKQRLSVKHRLGVRTGQRNNQAKIPPQRRAPSQ--IRGVAG 259
               ||.:.|.....|.::.:||..|.       |:|:|.|.|.        |..|.:  :||..|
 Frog   123 ---GRGMARGAMAMRGQNLRGRGGVA-------RMGLRRGMRG--------RGGPGRGMMRGAMG 169

  Fly   260 GRVEKRRSAQISQKKGVSASIAGRQGRPRRRSVARNAASSSGAVNNSASARRSRSRNRAAAVAAA 324
                         :.|:||  .||.|..|.|..                                
 Frog   170 -------------RGGMSA--RGRGGMTRGRGF-------------------------------- 187

  Fly   325 AIAATVQGRANPRQRRGRSAGAAKGKIIRNGKADKNAKVKATNGVKSGPQQQVRRGRSRSRKPTG 389
                 |:||.     |||..|.|                                          
 Frog   188 -----VRGRG-----RGRGRGVA------------------------------------------ 200

  Fly   390 KPQRPEVKREDLDMELDQYMSTTKSEMD 417
               ||.:.:|.||.:||.|||.||..:|
 Frog   201 ---RPAITKEQLDNQLDAYMSKTKGHLD 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9775NP_001262257.1 FoP_duplication 360..420 CDD:290576 13/58 (22%)
chtopNP_001011274.1 FoP_duplication <201..236 CDD:372765 13/25 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.