DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT2A and 5-HT7

DIOPT Version :9

Sequence 1:NP_730859.1 Gene:5-HT2A / 40575 FlyBaseID:FBgn0087012 Length:930 Species:Drosophila melanogaster
Sequence 2:NP_001263131.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster


Alignment Length:627 Identity:160/627 - (25%)
Similarity:229/627 - (36%) Gaps:225/627 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 NLTALNTT--STASTADMATEFAVTKSFLDYSPHGYDFLFLFVVFFIFAGGLGNILVCLAVALDR 314
            ||...|||  ..:.|..:..|||..:..|  .|....|:.:.::..|....:||:|||:||.:.|
  Fly   129 NLGDSNTTLVPLSDTPLLLEEFAAGEFVL--PPLTSIFVSIVLLIVILGTVVGNVLVCIAVCMVR 191

  Fly   315 KLQNVTNYFLFSLAIADLLVSLFVMPMGAIPAFLGYWPLGFTWCNIYVTCDVLACSSSILHMCFI 379
            ||:...||.|.|||::||.|:|.||||..:...|..|..|...|:|:|:.|||.|::|||::|.|
  Fly   192 KLRRPCNYLLVSLALSDLCVALLVMPMALLYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCAI 256

  Fly   380 SLGRYMGIRNPLGSRHRSTKRLTGIKIAIVWVMAMMVS-SSITVLGLVNEKNIMPEPNIC-VINN 442
            |:.||:.|..||....:.|.|...:.:.|||:.|..:| ..:.:||  ||........|| |..|
  Fly   257 SVDRYLAITKPLEYGVKRTPRRMMLCVGIVWLAAACISLPPLLILG--NEHEDEEGQPICTVCQN 319

  Fly   443 RAFFVFGSLVAFYIPMLMMVTTYALTIPLLRKKARFAAEHPESELFRRLGGRFTLRPQHSQQQLQ 507
            .|:.::.:|.:||||:.:|:..|                   .::| |...|..|..:.:|..||
  Fly   320 FAYQIYATLGSFYIPLSVMLFVY-------------------YQIF-RAARRIVLEEKRAQTHLQ 364

  Fly   508 MFSSFSGSNNKFLSMGDGNRNFNTEGEMEEGGAPSRRSGVEPAERPLMQQRTASSRSMGTVSFRN 572
              .:.:|:                       |:||     .|...||.....|||          
  Fly   365 --QALNGT-----------------------GSPS-----APQAPPLGHTELASS---------- 389

  Fly   573 VVNGTSGAAGSGRRTTGTAHSSFRFSGAGIFRHSSSSPASSCHSTSTSRSSSFWRKHGGYPNLMD 637
                     |:|:                  ||||....|..:||....||              
  Fly   390 ---------GNGQ------------------RHSSVGNTSLTYSTCGGLSS-------------- 413

  Fly   638 RLAIHLRLSLVPPSSHPNRRASVRVTISQPQLGYPTNVGGNGGRTVGATEVGAGGNGSSAGRTSN 702
                                                     ||   ||    ..|:||..|.:.:
  Fly   414 -----------------------------------------GG---GA----LAGHGSGGGVSGS 430

  Fly   703 SSLGGTSLMKIATIQGPILNQSQAAGGNHMVQKVKPTALKPEEPQRNKVRPFKFAFNRVATPTLN 767
            :.|.|:                                     |...|                 
  Fly   431 TGLLGS-------------------------------------PHHKK----------------- 441

  Fly   768 LRFLNNRSKRNSLSANAVATEQKATKVLGLVFFTFVLCWSPFFILNIIFAACPECQVPEHVVNTC 832
            |||             .:|.|:||:..||::...|.:||.|||||.:| .......||..:.:..
  Fly   442 LRF-------------QLAKEKKASTTLGIIMSAFTVCWLPFFILALI-RPFETMHVPASLSSLF 492

  Fly   833 LWLGYVSSTINPIIYTIFNRTFRAAFIRLLKCNCKRSGRPLR 874
            |||||.:|.:|||||...||.||..|..:|...|......:|
  Fly   493 LWLGYANSLLNPIIYATLNRDFRKPFQEILYFRCSSLNTMMR 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2ANP_730859.1 7tm_4 299..>428 CDD:304433 54/129 (42%)
7tm_1 302..>477 CDD:278431 68/176 (39%)
5-HT7NP_001263131.1 7tm_4 173..>342 CDD:304433 68/170 (40%)
7tm_1 179..507 CDD:278431 137/546 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449064
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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