DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT2A and mAChR-B

DIOPT Version :9

Sequence 1:NP_730859.1 Gene:5-HT2A / 40575 FlyBaseID:FBgn0087012 Length:930 Species:Drosophila melanogaster
Sequence 2:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster


Alignment Length:985 Identity:163/985 - (16%)
Similarity:286/985 - (29%) Gaps:422/985 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 NVTNTSLDMFLPNLTA-LNTTSTASTAD------MATEFAVTKSFLDYSPHGYDFLFLFVVFFIF 297
            :|.||:|.:.:.|.:: ..:|.:.|::|      :...||:.::.|        ......:..|.
  Fly    90 DVNNTNLLLAVRNQSSDGGSTMSGSSSDSEILGPVLPPFALWQTIL--------IAICLAICIIL 146

  Fly   298 AGGLGNILVCLAVALDRKLQNVTNYFLFSLAIADLLVSLFVMPMGAIPAFLGYWPLGFTWCNIYV 362
            ..| |||||.||..:||.::..:|||:.|||..|:|:....||...|....|||.||...|::::
  Fly   147 TVG-GNILVLLAFIVDRNIRQPSNYFIASLAATDMLIGTVSMPFYTIYVLKGYWDLGPMLCDLWL 210

  Fly   363 TCDVLACSSSILHMCFISLGRYMGIRNPLGSRHRSTKRLTGI--KIAIVWVMAMMVSSSITVLG- 424
            :.|...|..|...:..|::.||..::  :.:::||.:..|.:  .:.|.|::..:: ..|::.| 
  Fly   211 SVDYTVCLVSQYTVLLITIDRYCSVK--IAAKYRSWRTRTRVIYMVTITWIIPALL-FFISIFGW 272

  Fly   425 --LVNEKNIMPEPNICVIN-------NRAFFV---FGSLVAFYI--------------------- 456
              ...:::::  |..|.:.       |.|..:   :.:|:..::                     
  Fly   273 EHFTGKRDLL--PGQCAVQFLKDPIFNTALIIGYYWTTLIVLFVLYAGIYKTAYDMQKRSEAKQR 335

  Fly   457 PMLMMVTTYA---------------LTIPLLRKKARFAAEHPE-----SELFRRLGGRFTLRP-- 499
            .|..||...|               :...:|:.|...|.:..:     :.:.:||.|.....|  
  Fly   336 KMQSMVALSAGAMSGMAGHAAGIGVIEEKILKTKVELAGDQTDLDSACTTVIKRLSGSGQANPLA 400

  Fly   500 --------QHSQQQLQMFSSFSGSNNKFLSMGDGNRNFNTEGEMEEGGAPS----RRSGVEPAER 552
                    ...:|:....:.......|..:..|..::       |...:|:    ..|.|..|::
  Fly   401 VATEEVEKMTPEQRRASAAKIQEEAKKREAAVDAEKS-------ERSSSPAFDSDEESSVNQAQQ 458

  Fly   553 PLMQQRTASSRSMGTVSFRNVVNGTSGA----AGSGRRTTGTAHSSFRFSGAGIFR-------HS 606
            .:.||:..:.|...::   .:|.|...|    .|.|.....|.:|.   |...:.:       |.
  Fly   459 LITQQKLNNMRKRSSI---GLVFGAQAALLATRGKGNLQKSTTNSK---SIEAMHQYHHHQQHHH 517

  Fly   607 SSSPASSCHSTSTSRS--------SSFWRKHGGYPN------------LMDRLAIHLRL------ 645
            :.||.....|....||        ....:.|...||            .:.::|.|.||      
  Fly   518 NQSPLQRAQSKEEMRSLHHHQNQQQPHHQHHQNQPNPPLDRPKRTSCSTLSQIAEHDRLVDLSAP 582

  Fly   646 ---------------------------SLV----------------------------------- 648
                                       .||                                   
  Fly   583 PTLLNTSDPLSPVDLAPIEVPSDQVHQGLVQTILPPPDAFQCPTPLSDDYSDRPFGNSSGNSELA 647

  Fly   649 ----------------------------------------------------PPSSH-------- 653
                                                                ||.|:        
  Fly   648 LTYDLMTNSELRYMDESSAMLASVTANSTTSPNDSVQGKPPVLPPPPPARRNPPKSNLNQSLSQT 712

  Fly   654 ----------------------------------------------------------------- 653
                                                                             
  Fly   713 PSQNQSPSQSLSLNLNPNHNQSQSQSIEEAVAIEKRLLVSYTGIEDFAKVRRESCIEAICLLDVP 777

  Fly   654 -------PNRRA----------------------SVRVTISQPQLGYPTNVGG------------ 677
                   |:|||                      |.:|..|.||.|.|.:..|            
  Fly   778 GKLAADCPHRRASSPMETSSKDAILYSPMPPMPLSPKVKTSTPQTGTPQSAAGVTPPVPLERIEE 842

  Fly   678 -------------NGGRTVGATEVGAGGNGSSAGRTSNSSLGGTSLMKIATIQGPILNQSQAAGG 729
                         ..|.|.....||.||.....|.|..:                       ||.
  Fly   843 RETSDSNTNKMPSTSGTTSSTGGVGGGGEQDGVGATKKN-----------------------AGD 884

  Fly   730 NHMVQKVKPTALKPEEPQRNKV----RPFKFAFNRVATPTLNLRFLNNRSKRNSLSANAVATEQK 790
            :...::.|..|......:|..:    :.||   ::.|.|.:    |....::.|.|.|..   :|
  Fly   885 DDANREEKSLAASRNSSKRAFIHSIGKHFK---SKKALPLI----LGVGGRQKSKSENRA---RK 939

  Fly   791 ATKVLGLVFFTFVLCWSPFFILNIIFAAC--PECQVPEHVVNTCLWLGYVSSTINPIIYTIFNRT 853
            |.:.:..:...||.||:|:.:|.::...|  |.| :.||:.....:|.|.:|.:||..|.:.|:.
  Fly   940 AFRTISFILGCFVACWTPYHVLALVEGFCRHPPC-INEHLYMFSYFLCYANSPMNPFCYALANQQ 1003

  Fly   854 FRAAFIRLLK 863
            |:..|.|:||
  Fly  1004 FKKTFTRILK 1013

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2ANP_730859.1 7tm_4 299..>428 CDD:304433 40/133 (30%)
7tm_1 302..>477 CDD:278431 50/225 (22%)
mAChR-BNP_649764.1 7tm_1 150..>341 CDD:278431 45/195 (23%)
7tm_4 150..>336 CDD:304433 44/190 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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