DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT2A and Dop2R

DIOPT Version :9

Sequence 1:NP_730859.1 Gene:5-HT2A / 40575 FlyBaseID:FBgn0087012 Length:930 Species:Drosophila melanogaster
Sequence 2:NP_001014758.2 Gene:Dop2R / 33007 FlyBaseID:FBgn0053517 Length:905 Species:Drosophila melanogaster


Alignment Length:1017 Identity:244/1017 - (23%)
Similarity:376/1017 - (36%) Gaps:322/1017 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 STGTSETATATAAVASASASDTA-----ATFTLRHFNCRLE----------EADWPGPRQPFIDC 61
            :..|:.|.:||.:.|:||.|.||     ||:...|.....:          :|...||..|    
  Fly    42 TAATAATTSATLSTAAASTSTTAAPSAGATWINHHLAVEADSSQPANGSDAQAGVEGPTMP---- 102

  Fly    62 EGSHTNSTSYTPSSLPTSKNLIEGPNNTFQCARQA-IDEAEHNAFYSCDGESPLS--ENCTLRLK 123
                   ..|.|        |.|......:.|..| ||:.......|...|:.:.  ||.|    
  Fly   103 -------AGYLP--------LYEDVETAAEDAGYALIDDISEWLLGSVGSEAAVGGPENST---- 148

  Fly   124 ARLLRWPYEAYEHIRLAINGA------LSDYASDKLSDSSSCDEGGMVLQCKLGQAHELLLCHLQ 182
                          .||:.||      |....|.:.:.|:|..|.|           |.....|:
  Fly   149 --------------NLAVTGANGTLAWLEALNSTQPAQSNSSAEDG-----------ERGRYSLR 188

  Fly   183 QLEREPLREVGSAEESFSNDSLLQAFQIELGAERDGLWSFLNLSELMEPDHGFLG------IMNV 241
            ....:.|...|:|......|:.:..  |:.|.|.    :..|::: .|.|:|.||      ::..
  Fly   189 SFVEQQLAGGGAAGAGDGGDAGIAL--IDSGEEA----ALDNVAD-AETDYGMLGGFGDAELLQR 246

  Fly   242 TNTSLDMFLPNLTALNTTS--------------TASTA----------DMATEFAVTKSFLDYSP 282
            |.|.....|.|.||.:|||              .|.||          ..:|...:.::|.||.|
  Fly   247 TATVARETLGNRTAPSTTSYDGGGSGDVGVAGGLAGTAGGGVGGAGGSGGSTFMLLLENFNDYFP 311

  Fly   283 H--------------------------------------GYD----------------------- 286
            :                                      ||.                       
  Fly   312 NYNGSTVSGTSTIAPGVAITGSRGSGLLLEQNLTGLYLDGYRLNCTNETLNLTDSCGELRVVDHN 376

  Fly   287 ----FLFLFVVFFIFAGGLGNILVCLAVALDRKLQNVTNYFLFSLAIADLLVSLFVMPMGAIPAF 347
                .|.||.:..:|    |||||.|:|..:|.||.|||||:.|||||||||::.|||.......
  Fly   377 YWALILILFPILTLF----GNILVILSVCRERSLQTVTNYFIVSLAIADLLVAVVVMPFAVYFLV 437

  Fly   348 LGYWPLGFTWCNIYVTCDVLACSSSILHMCFISLGRYMGIRNPLG-SRHRSTKRLTGIKIAIVWV 411
            .|.|.|....|:.|:..||:..:|||.::..||:.||:.:..|:. ::|::::|:. :.|.:||.
  Fly   438 NGAWALPDVVCDFYIAMDVICSTSSIFNLVAISIDRYIAVTQPIKYAKHKNSRRVC-LTILLVWA 501

  Fly   412 MAMMVSSSITVLGLVNEKNIMPEPNICVINNRAFFVFGSLVAFYIPMLMMVTTYALTIPLLRKKA 476
            ::..:.|.| ||||.|..|  .||::|...|..|.::.||.:||||.::||..|......||.:|
  Fly   502 ISAAIGSPI-VLGLNNTPN--REPDVCAFYNADFILYSSLSSFYIPCIIMVFLYWNIFKALRSRA 563

  Fly   477 R--FAAEHPE-SELFRRLGGRFTLRPQHSQQQLQMFSSFSGSNNKFLSMGDGNRNFNTEGEMEEG 538
            |  .||..|. |||                                           |.|.:.|.
  Fly   564 RKQRAARKPHLSEL-------------------------------------------TGGSVIEN 585

  Fly   539 GAPSRRSGVEPAERPLMQQRTASSRSMGTVSFRNVVNGTSGAAGSGRRTTGTAHSSFRFSGAGIF 603
            .|.:||.    ||..|...|.| ||.:...:      .|:.|:||.....               
  Fly   586 IAQTRRL----AETALDSSRHA-SRILPDEA------ATNTASGSNEEED--------------- 624

  Fly   604 RHSSSSPASSCHSTSTSRSSSFWRKHGGYPNLMDRLAIHLRLSLVPPSSHPNRRASVRVTISQPQ 668
            .::.|.....||.....:|:.|                 :..::|..:.:    :.|....:|||
  Fly   625 ENAISPDIDDCHVIVNDKSTEF-----------------MLATVVEETGN----SVVAQITTQPQ 668

  Fly   669 LGYPTNVGGNGGRTVGATEV---------GAGGNGSSAGRTSNSSLGGTSLMKIATIQGPILNQS 724
            | ...:..||......|:.|         .:....:||...|:.|...:.|...||:|...::..
  Fly   669 L-VVADPNGNHDSGYAASNVDDVLAGVAPASASAATSAAPRSSGSPPDSPLPSGATLQRSSVSSQ 732

  Fly   725 QAAGGNHMVQKVKP-----------TALKPEEPQRNKVRPFKFAFNRVATPTLNLRFLNNRSKRN 778
            :...|:...::.:|           .|:||....|..|:.........:|.:...:..:.:.|:|
  Fly   733 RRPTGDDSPKRGEPALRSVGVDNSSVAMKPLSFVRYGVQEAMTLARNDSTLSTTSKTSSRKDKKN 797

  Fly   779 SLSA-----------------NAVATEQKATKVLGLVFFTFVLCWSPFFILNIIFAAC----PEC 822
            |.::                 ::...|:||||.|.:|...|:.||.|||..||:.|.|    .:|
  Fly   798 SQASRFTIYKVHKASKKKREKSSAKKERKATKTLAIVLGVFLFCWLPFFSCNIMDAMCAKFKKDC 862

  Fly   823 Q--VPEHVVNTCLWLGYVSSTINPIIYTIFNRTFRAAFIRLL 862
            :  :..:::.|  ||||::|.:||:||||||..||.||.:::
  Fly   863 RPGLTAYMMTT--WLGYINSFVNPVIYTIFNPEFRKAFKKIM 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2ANP_730859.1 7tm_4 299..>428 CDD:304433 53/129 (41%)
7tm_1 302..>477 CDD:278431 71/175 (41%)
Dop2RNP_001014758.2 7tmA_D2-like_dopamine_R 376..>565 CDD:320181 76/196 (39%)
TM helix 1 377..403 CDD:320181 11/29 (38%)
TM helix 2 410..436 CDD:320181 16/25 (64%)
TM helix 3 448..478 CDD:320181 11/29 (38%)
TM helix 4 490..513 CDD:320181 7/24 (29%)
TM helix 5 529..558 CDD:320181 11/28 (39%)
7tm_GPCRs <822..898 CDD:333717 34/77 (44%)
TM helix 6 825..850 CDD:320095 12/24 (50%)
TM helix 7 866..891 CDD:320095 12/26 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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