DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 5-HT2A and DRD4

DIOPT Version :10

Sequence 1:NP_730859.1 Gene:5-HT2A / 40575 FlyBaseID:FBgn0087012 Length:930 Species:Drosophila melanogaster
Sequence 2:NP_000788.2 Gene:DRD4 / 1815 HGNCID:3025 Length:419 Species:Homo sapiens


Alignment Length:327 Identity:56/327 - (17%)
Similarity:102/327 - (31%) Gaps:122/327 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 PGSLAAWFRQKYPQLTVGSVASSAPVNLKLDFYEYAMVVEDD----------------------- 225
            |.::.|..::||...:    ||...:..|..|.:...:.|||                       
Human    32 PLTVEARIKEKYSTFS----ASGENIERKRFFRKSVEMTEDDKVAESSRRDERKAATNISRVDKV 92

  Fly   226 ----LR----ITDPKCAQAT----KDAF-----------VQMQKLALTAEGRNSLNNHFNLQPPF 267
                ||    :...:|::||    ||.|           .:|:.:|.:..||             
Human    93 PTNVLRGGQEVKYEQCSKATSESSKDCFKEKTEKEMEEEAEMKAVATSPSGR------------- 144

  Fly   268 DANTTKLDINNFFGNIFNTYQGMTQYT-------------------------------------- 294
               ..|.||....|.....|:|:...|                                      
Human   145 ---FLKFDIELGRGAFKTVYKGLDTETWVEVAWCELQDRKLTKAEQQRFKEEAEMLKGLQHPNIV 206

  Fly   295 --YDGQSNSTHSDKTVRKMCDIMTNAT-----ETDVVMRVENLFLWFNQMEPASANLTVMPNSYW 352
              ||...::....|.:..:.::||:.|     :...||:.:.|..|..|:   ...|..:.....
Human   207 RFYDSWESTLKGKKCIVLVTELMTSGTLKTYLKRFKVMKPKVLRSWCRQI---LKGLQFLHTRTP 268

  Fly   353 DVISQ-VGSGDLNVLGPDGAAARGWMWLCCNEIGFLQTTNQGNNVFGTGVPLNLFIDMCTDMFGD 416
            .:|.: :...::.:.||.|:...|.:.|..     |..|:...:|.||  |..:..:|..:.:.:
Human   269 PIIHRDLKCDNIFITGPTGSVKIGDLGLAT-----LMRTSFAKSVIGT--PEFMAPEMYEEHYDE 326

  Fly   417 SM 418
            |:
Human   327 SV 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2ANP_730859.1 7tm_GPCRs 298..>473 CDD:475119 24/127 (19%)
TM helix 2 321..343 CDD:410628 5/21 (24%)
TM helix 3 359..381 CDD:410628 5/21 (24%)
TM helix 4 404..420 CDD:410628 2/15 (13%)
TM helix 5 443..466 CDD:410628
7tm_GPCRs <779..858 CDD:475119
TM helix 6 792..814 CDD:410628
TM helix 7 826..851 CDD:410628
DRD4NP_000788.2 7tmA_D4_dopamine_R 38..411 CDD:320434 54/321 (17%)
TM helix 1 38..62 CDD:320434 6/27 (22%)
TM helix 2 69..95 CDD:320434 1/25 (4%)
TM helix 3 108..138 CDD:320434 7/29 (24%)
TM helix 4 150..173 CDD:320434 5/22 (23%)
TM helix 5 189..218 CDD:320434 2/28 (7%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 230..264 8/36 (22%)
4 X 16 AA approximate tandem repeats of [PA]-A-P-G-L-P-[PQR]-[DG]-P-C-G-P-D-C-A-P 249..312 15/72 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..336 2/12 (17%)
TM helix 6 339..369 CDD:320434
TM helix 7 379..404 CDD:320434
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.