DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT2A and ADRB3

DIOPT Version :10

Sequence 1:NP_730859.1 Gene:5-HT2A / 40575 FlyBaseID:FBgn0087012 Length:930 Species:Drosophila melanogaster
Sequence 2:NP_000016.1 Gene:ADRB3 / 155 HGNCID:288 Length:408 Species:Homo sapiens


Alignment Length:674 Identity:146/674 - (21%)
Similarity:213/674 - (31%) Gaps:300/674 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 NTSLDMF--LPNLTALNTTSTASTADMATEFAVTKSFLDYSPHGYDFLFLFVVFFIFAGGLGNIL 305
            |:||..:  ||.| |.||.:|:....:..|.|:..:.|              ...:.|...||:|
Human     8 NSSLAPWPDLPTL-APNTANTSGLPGVPWEAALAGALL--------------ALAVLATVGGNLL 57

  Fly   306 VCLAVALDRKLQNVTNYFLFSLAIADLLVSLFVMPMGAIPAFLGYWPLGFTWCNIYVTCDVLACS 370
            |.:|:|...:||.:||.|:.|||.|||::.|.|:|..|..|..|:||||.|.|.::.:.|||..:
Human    58 VIVAIAWTPRLQTMTNVFVTSLAAADLVMGLLVVPPAATLALTGHWPLGATGCELWTSVDVLCVT 122

  Fly   371 SSILHMCFISLGRYMGIRNPLGSRHRSTKRLTGIKIAIVWVMAMMVSSSITVLGLVNE------- 428
            :||..:|.:::.||:.:.|||......|||.....:.:|||    ||::::...::::       
Human   123 ASIETLCALAVDRYLAVTNPLRYGALVTKRCARTAVVLVWV----VSAAVSFAPIMSQWWRVGAD 183

  Fly   429 ---KNIMPEPNICVI-NNRAFFVFGSLVAFYIPMLMMVTTYALTIPLLRKKARFAAEHPESELFR 489
               :.....|..|.. :|..:.:..|.|:||:|:|:|:..||....:..::.|         |.|
Human   184 AEAQRCHSNPRCCAFASNMPYVLLSSSVSFYLPLLVMLFVYARVFVVATRQLR---------LLR 239

  Fly   490 RLGGRFTLRPQHSQQQLQMFSSFSGSNNKFLSMGDGNRNFNTEGEMEEGGAPSRRSGVEPAERPL 554
            ...|||                                                    .|.|.| 
Human   240 GELGRF----------------------------------------------------PPEESP- 251

  Fly   555 MQQRTASSRSMGTVSFRNVVNGTSGAAGSGRRTTGTAHSSFRFSGAGIFRHSSSSPASSCHSTST 619
                .|.|||:                                         :.:|..:|     
Human   252 ----PAPSRSL-----------------------------------------APAPVGTC----- 266

  Fly   620 SRSSSFWRKHGGYPNLMDRLAIHLRLSLVPPSSHPNRRASVRVTISQPQLGYPTNVGGNGGRTVG 684
                                        .||...|                              
Human   267 ----------------------------APPEGVP------------------------------ 273

  Fly   685 ATEVGAGGNGSSAGRTSNSSLGGTSLMKIATIQGPILNQSQAAGGNHMVQKVKPTALKPEEPQRN 749
                       :.||                                     :|..|.|      
Human   274 -----------ACGR-------------------------------------RPARLLP------ 284

  Fly   750 KVRPFKFAFNRVATPTLNLRFLNNRSKRNSLSANAVATEQKATKVLGLVFFTFVLCWSPFFILNI 814
                              ||                  |.:|...|||:..||.|||.|||:.|:
Human   285 ------------------LR------------------EHRALCTLGLIMGTFTLCWLPFFLANV 313

  Fly   815 IFAACPECQVPEHVVNTCLWLGYVSSTINPIIYTIFNRTFRAAFIRLLKCNCKRSGRPLRYRSVT 879
            :.|......||........||||.:|..||:|| ..:..||:||.||| |.|   ||.|......
Human   314 LRALGGPSLVPGPAFLALNWLGYANSAFNPLIY-CRSPDFRSAFRRLL-CRC---GRRLPPEPCA 373

  Fly   880 EGRGALSLCAPSALPLAISFQGAP 903
            ..|.||   .||.:|.|.|....|
Human   374 AARPAL---FPSGVPAARSSPAQP 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2ANP_730859.1 7tm_GPCRs 298..>473 CDD:475119 61/185 (33%)
TM helix 2 321..343 CDD:410628 11/21 (52%)
TM helix 3 359..381 CDD:410628 6/21 (29%)
TM helix 4 404..420 CDD:410628 5/15 (33%)
TM helix 5 443..466 CDD:410628 7/22 (32%)
7tm_GPCRs <779..858 CDD:475119 28/78 (36%)
TM helix 6 792..814 CDD:410628 11/21 (52%)
TM helix 7 826..851 CDD:410628 9/24 (38%)
ADRB3NP_000016.1 7tm_GPCRs 51..356 CDD:475119 113/569 (20%)
TM helix 2 73..95 CDD:320625 11/21 (52%)
TM helix 3 111..133 CDD:320625 6/21 (29%)
TM helix 4 156..172 CDD:320625 5/19 (26%)
TM helix 5 202..225 CDD:320625 7/22 (32%)
TM helix 6 291..313 CDD:320625 11/21 (52%)
TM helix 7 325..350 CDD:320625 9/25 (36%)

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