DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fip1 and tcerg1a

DIOPT Version :10

Sequence 1:NP_649476.1 Gene:Fip1 / 40569 FlyBaseID:FBgn0037255 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_938171.2 Gene:tcerg1a / 323071 ZFINID:ZDB-GENE-030131-1791 Length:1000 Species:Danio rerio


Alignment Length:628 Identity:124/628 - (19%)
Similarity:194/628 - (30%) Gaps:271/628 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 MGMGPPGM-----HSI-QSMVGMGGESGMQMPP-----PGMPPPMMQHQSRSGMGLMQRPP---- 339
            |..|||.:     |:: |....:.|...:.:||     |.||.|:      .||.....||    
Zfish   273 MTTGPPTLPVALSHTVPQPATTIPGFPPVMVPPFRVPLPAMPIPL------PGMLPSMAPPLVPM 331

  Fly   340 -RPISTTGGDRGGDRERAVKENAIQVMTAECREYSRGGLGPMAPNFPLPGA---SEEPFFHEPEP 400
             .|..|..|..|                                   ||||   |:...|..||.
Zfish   332 MPPQMTIAGPAG-----------------------------------LPGALGTSDWAEFKTPEG 361

  Fly   401 FDYGY-EPTQESQWN--------NDNAGWVPSGIKELTPGH-AHMQQPPPGMPPP---------- 445
            ..|.| :.|||:.|:        ...:..|...::|:.... ..|:...|.:.||          
Zfish   362 KSYYYNKHTQETTWDKPEELRDTEKESEKVMDSVEEMMEAEILSMEDGSPQIDPPKEQKEELKEE 426

  Fly   446 -----------GMSVPPPQMGGPP---------------PNLRGIMPPNMRMPPNMNMGPPPGMM 484
                       ...|....:.|.|               |..|            ::|...|..:
Zfish   427 EMTEEQKAAKKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTR------------LSMWERPEDL 479

  Fly   485 MGG-------NAPPQMRMGMAPPQRLAM----------GDRGAYDDDRERRRREKEKL------- 525
            :|.       .|||..| |:....|||:          .|....:..:.:||:.:||:       
Zfish   480 LGRADVDKAIQAPPHKR-GLDNSHRLALVKDEQEFPVSEDAADEEPSKAKRRKVEEKMELDPEKE 543

  Fly   526 ------LKKDQLR---------KDFLDMLRERHDIERHTRWYDIKKKFEADPRYRALDSSYREEY 575
                  ||..:.|         ..|.:||.|| .:...:.|...:.|...||||..|:...|::.
Zfish   544 AAMEAELKAARERAVVPQEARISQFKEMLLER-AVSAFSTWEKERHKIVFDPRYLLLNPKERKQV 607

  Fly   576 FEDYLHLLKEEKRKERDLKERE-------------------------RHRDKERSRDKDKDKDKE 615
            |:.|:....||:|:|:..|..:                         :|....|.:..:|.||:|
Zfish   608 FDQYVKTRAEEERREKKNKIMQVKDDFRKMMEESKLGVRTTFSEFAAKHARDSRFKAVEKMKDRE 672

  Fly   616 ------------KDKDKDKDK-----------------------EKDKEK--------------- 630
                        |:|:..|::                       .|.|||               
Zfish   673 AIFIEFMTAFRKKEKENSKNRGEKVKLDFFELLSDYHVDIQQRWSKVKEKLETDPRYKAVETSAA 737

  Fly   631 ------------------DKDKDKEKEKDKESSRRERSRS--REKSSRRKSKSREKDRSER---- 671
                              :|:|:.||:...|:|.|||.|:  |.:|.:.|...||:::.:|    
Zfish   738 REEFFKNYVERLAKNPSAEKEKELEKQARVEASLRERERTVQRFRSEQTKEIDREREQHKREEAV 802

  Fly   672 -------SSKSSSSNTGGSSSRSEKKKSHR------KDKEEDD 701
                   |....||:...|.:|...:|.||      .::||.:
Zfish   803 QHFKALLSDMVKSSDAAWSDTRRSLRKDHRWESSSLLEREEKE 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fip1NP_649476.1 Fip1 219..261 CDD:461573
FF 530..579 CDD:426471 15/57 (26%)
tcerg1aNP_938171.2 WW 141..166 CDD:459800
Herpes_BLLF1 <196..>345 CDD:282904 21/112 (19%)
PRP40 339..912 CDD:227435 105/556 (19%)
FF 917..976 CDD:426471
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.