DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sac and Dhc1

DIOPT Version :10

Sequence 1:NP_649475.3 Gene:sac / 40568 FlyBaseID:FBgn0037254 Length:1079 Species:Drosophila melanogaster
Sequence 2:NP_001287256.1 Gene:Dhc1 / 41171 FlyBaseID:FBgn0287844 Length:4724 Species:Drosophila melanogaster


Alignment Length:1333 Identity:244/1333 - (18%)
Similarity:433/1333 - (32%) Gaps:458/1333 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ENLEVGQNYEGSQEFDESSTSSISNKGPD-----DSQFKREAEKAICIMPPRPGTTMMNYQELYI 63
            |.|.:|:..|.:....|.:...::::..|     :|.|..:.|:.|     ....::.:.....|
  Fly   536 EGLLLGEALEDASNHFEEAKKEVTSRKYDYLDHRNSDFNIDFERFI-----HKTNSLKDTIATLI 595

  Fly    64 PRNQLTDVYYPIQEAQRWLTLMDKMGKAHRFPLPTILPKVIQ-TRYVPKRHLPKDVEVDRRRRQY 127
            .::  .|..:...:..|:|...:|:  :.:.||..:..|..: .|||.|       ||||..:.:
  Fly   596 EKD--FDTVWETPQCIRFLVRFEKV--SEKIPLTRMDEKYTRILRYVEK-------EVDRILKTF 649

  Fly   128 QKINLVNELAK-----AG--------------LTDDVLQPTEEQYNVMSEFAFPHKFPLSY---- 169
            :|......||:     ||              |.|.|:     ::.|:|.........:.|    
  Fly   650 RKQRDDPPLARNFPPIAGRIHWCRALSLHITELMDAVM-----EHVVLSSLPMAKDLDVRYHNVL 709

  Fly   170 -----FDDSNFDINSPAAWFELGV-VGDAHYPLPAKAYLPYNQSLLNCQWGMAAVTAHH------ 222
                 ::|....|     |.:..| |.||....|          ||:.|.....|..|.      
  Fly   710 GILQEYEDEIVSI-----WLDQDVSVADACLLQP----------LLSLQGDKLFVNLHPTIPLLI 759

  Fly   223 EDSDLWTLLSLE---DGCTYTVPKLQFMFMAEDPHKYIKRLQAAVHE-RHKGEQLMLMELI-VDC 282
            .::.:...|.:|   ...|....:..|:.:.:..:..||...:.|.. :.:...|.|.:|: :..
  Fly   760 REAKMLAKLDIELPIVAATLMSRQQYFITIQDSLNCLIKMFLSTVRAVKLEVRPLFLPQLVRLTA 824

  Fly   283 VLHEDIES--------TVFYSFKPIESVLQAAKVSEQCKRRLRS-EV----------NLVFERLM 328
            :|...:.:        |.||               |:||:.:.| :|          |.:...||
  Fly   825 MLKPGLHTINWTNQNWTEFY---------------ERCKQAIESFDVLVARVHDIYSNRILHVLM 874

  Fly   329 ALYELEQFILKMPKEFPQFRNINLKEFLPRSFAVDVSGKERLELQALGITMQEKRYDYLKASLFY 393
            .:.::...||....|.     ..:.|||.||       :|.....|:.:..:.:           
  Fly   875 WMQDVSLQILPADDEI-----WTVDEFLERS-------EEACRKAAIELNRKSQ----------- 916

  Fly   394 CVGGIEAMAGVAIECQYIETLSIFICSFSKPLALVDFLQA--QEAHSDNVATFLKVYWP------ 450
                   |...|:|               :.|:|||...|  :|...|:|.|......|      
  Fly   917 -------MVSEAVE---------------EVLSLVDRATAAFKEIAGDDVITLFDAATPKGDNSG 959

  Fly   451 -----------------------------QQ------------LTTVITVVLRALGKGWLDISLN 474
                                         ||            |:.:.|.  .:|.||..|:..|
  Fly   960 SGGRKPEDGGGGGGGAAAPSTSGGGGGGQQQDWSILWSCFENPLSLLSTT--ESLPKGMQDMVCN 1022

  Fly   475 TWTVYLMCKISRFILQVKFRMQESMEVLLETSLMNFSHFVCDPCLQFLELKSNYKWTNNYIDTEF 539
            . .|.:....||.::.|..::   :...|:|..   ..|:.|                   :.|.
  Fly  1023 A-VVEMRRYYSRKVIDVLIKV---IRAALDTLR---RRFIAD-------------------ENET 1061

  Fly   540 PFQKPVFAMTLGISEDRKVFYSTDPDEFQPGLVEIFKKCLEKSSGVRCIDGSVMSFLKFAPNLYI 604
            .|:|||||:...: :...|....:.||.|..||...|.....:.||     :..|..|..|.: .
  Fly  1062 VFKKPVFALHAQL-QIPHVVIKPNLDELQDILVTAGKNITGIAKGV-----AQWSSGKDPPQV-S 1119

  Fly   605 LTVE-----------------------LIEDRFLRENELLKNCY---------AKAVLPLRAYAR 637
            :||:                       |..:...:...:||:.|         ||||..|.:..:
  Fly  1120 MTVQPRVGRNHNESTGGGKSRRRKIYCLASEERPQMPHMLKSFYSAIMDNKEVAKAVNQLASCTK 1184

  Fly   638 LYERFIDFYLLNVNTYMQAYAQAHKPSSEVKRDILENKRLKEELREI-LPAFITIGPFYINVDTM 701
                       ||...:|.|.:..||    ...:.:|.|...:|.|. |..|.|......::|. 
  Fly  1185 -----------NVKPEIQTYIKRWKP----YHFLWKNDRTTRQLMEFGLQEFETTLRCLSDLDA- 1233

  Fly   702 KQFMIKKRIEVVRRIFEYYVDRMYETNEVLLDRC-----------------------LEMFRRIA 743
             ..:::..:||..:....|.:::.....:.:..|                       .||.|:: 
  Fly  1234 -NLLVEPDMEVFGQCVAVYNEKLKYGLAIEIKSCNHKIGQAMKKKYKKEMDYVYAVINEMDRKL- 1296

  Fly   744 ERPISIEHLYEIRDFAQTVPDL----VD-ELKAD-------------IQVMWLEYDLLDSFFYNL 790
            :||  |..|.::|...:|:..:    || ||:.|             :||...::||:|    ||
  Fly  1297 DRP--IRDLDDVRMIMETLGKIREQEVDMELRIDPIEEAFNVLTRYEVQVEREQFDLVD----NL 1355

  Fly   791 SDHQFAMKWNVYAWPHQIMVRL----STLKDEQKVDIEDFLR---------LHASECQA------ 836
            .    |...|:.|...|..|:|    ...:|:.:.::::|.:         ..|...||      
  Fly  1356 R----ATFQNLLAGALQAQVKLLDMQPAFQDDLRTNLDNFKQDKISYVTEYRTAGPMQAGLTPRE 1416

  Fly   837 -------FEERLESLNDEVQAYSLAFNTNRAQETSVDIKKTWALIKELEKVSQTLQFRQELFELE 894
                   |:.|.|.:...:|.|..........:|.         ..||.::.:.|...|:|::| 
  Fly  1417 ASDRLILFQNRFEGMWRRLQTYQSGEELFGLPQTD---------YPELGQIRKELNLLQKLYKL- 1471

  Fly   895 PLSVEFLESIIASFTPYKNLWYGCANFLKLEDATLGNPIAQLDLEDVWNNLMRLRDELNESMKIF 959
                  ...:|...:.|.::                 |..::|:|::.|.||..::...:..|..
  Fly  1472 ------YNDVIDRVSSYYDI-----------------PWNEVDIEEINNELMEFQNRCRKLPKGL 1513

  Fly   960 HEKVEIMDVAKTFIAKIDDFVPVYNSIKDIRNENWMYIHWQELSAITGQEIKYSVAMNYQYLIRK 1024
            .|......:.||    ||||..:...::.:.|:.....|||.:..:|    :|....:.:....|
  Fly  1514 KEWPAFHALKKT----IDDFNDMCPLLELMANKAMKPRHWQRIMDVT----RYIFEFDSEGFSLK 1570

  Fly  1025 GILDV--------LPEVHIISEKA------------------------NNEAEEIRRAIEEEERR 1057
            .||:.        :.::.|.:.|.                        ||..|.:.|.....|..
  Fly  1571 NILEAPLLKHKEDIEDICISAMKEKDIEAKLKQVTNEWSVHELQFMSFNNRGELLLRGDTTAETI 1635

  Fly  1058 KQAELNAMLL------------RKQLRKCRRDI 1078
            .|.|.:.|:|            |||:::...|:
  Fly  1636 GQLEDSLMVLGSLLSNRYNAPFRKQIQQWVYDL 1668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sacNP_649475.3 DHC_N2 901..>1042 CDD:462462 27/172 (16%)
Dhc1NP_001287256.1 DHC_N1 287..843 CDD:462457 62/342 (18%)
DYN1 1178..4372 CDD:227570 103/560 (18%)
DHC_N2 1455..1860 CDD:462462 45/246 (18%)
AAA_6 1994..2321 CDD:463697
Dynein_C 4425..4721 CDD:465677
Blue background indicates that the domain is not in the aligned region.

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