DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sac and dnah9

DIOPT Version :10

Sequence 1:NP_649475.3 Gene:sac / 40568 FlyBaseID:FBgn0037254 Length:1079 Species:Drosophila melanogaster
Sequence 2:XP_031750656.1 Gene:dnah9 / 100494609 XenbaseID:XB-GENE-5753499 Length:4465 Species:Xenopus tropicalis


Alignment Length:961 Identity:181/961 - (18%)
Similarity:316/961 - (32%) Gaps:328/961 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 LHEDIESTVFYSFKPIESVLQAAKVSEQCKRRLRSEVNLVFERLMALYELEQFILKMPKEFPQFR 348
            |.|.:::| :.:|:.:......:....|.|::        :|.:|||  ||::            
 Frog   596 LRERLQNT-YSNFRHVTHPCMESAEGAQMKQK--------YEEMMAL--LEKY------------ 637

  Fly   349 NINLKEFLPRSFAVDVSGKERLELQALGITMQEKRYDYLKASLFYCVGGIEAMAGVAIECQYIET 413
                ||.|...:...||.|.:..|....|...|      ...|.: |.....:..|..|.:|::.
 Frog   638 ----KEKLYEEWCRTVSEKSQYNLTRPLIVRDE------NTKLIF-VNFDPQLVSVLREVKYLQE 691

  Fly   414 LSIFICSFSKPLALVDFLQAQEAHSDNVATFLKVYWPQQLTTVITVVLRALGKGWLDISLNTWTV 478
            |.:    .:.|....|...::|::....|.                         |:::.|.:. 
 Frog   692 LRM----ETIPTEAGDIFSSKESYRTFTAN-------------------------LELTANRYN- 726

  Fly   479 YLMCKISRFILQVKFRMQESMEVLLETSLMNFSHFVCDPCLQFLELKSNYKWTNN----YI---- 535
                |:.|.||:|:|       .|:|..|.|..       ::..|.:....|..|    ||    
 Frog   727 ----KVMRTILEVEF-------PLIEGQLQNID-------VRLKEAEETLNWKANGVWEYIQEVR 773

  Fly   536 ----DTEFPFQK-----------------PVFAMTLG---------------------------- 551
                |.|...||                 |:|....|                            
 Frog   774 DMVHDLERRVQKARDNVDEIQAIMKTWVLPIFERKDGRKEALLSLDDRSDRLEKRYSLIRESGTK 838

  Fly   552 ----ISEDRKVFYSTDP-------------DEFQPGL---VEIFKKCL----EKSSGVRCIDGSV 592
                :.|:|::| |.||             |....|.   :|...|||    :..:|:..:....
 Frog   839 LHALLKENRELF-SADPSSDVWKAYVDFIDDMVLDGFFNAIECSLKCLLDNTDAKAGLAPLFEVQ 902

  Fly   593 MSFL----KFAP--------NLYILTVELIEDRF--------LRENEL----------------L 621
            |..|    .|.|        .||.:...||.|.:        |.|:..                :
 Frog   903 MDLLIPDMVFRPGLEHGSSDGLYDIIEGLINDIYRISALVPRLAEHSTFSHYQADMEDMADLADM 967

  Fly   622 KNCYAKAVLPLRA-----------YARLY----ERFIDFYLLNVNTYMQAYAQAH--------KP 663
            :|...::|..:..           ||.||    :.|:..:||..:.......:||        .|
 Frog   968 RNAIMESVQNVMTSCTDYRNTFDHYAYLYVDDRKEFMRQFLLYGHVLTAEEIEAHAEDGVPETPP 1032

  Fly   664 S-SEVKRDILENKRLKEELREILPAFITIGPFYINVDTMKQFMIKKRIEVVRR---IF-EYYVDR 723
            | .:.|..|...:::.||:..:.|  :.|...::.||.  |......:.||:|   :| ::.:|.
 Frog  1033 SLQQFKEQIDSYEKIYEEIGRVEP--VNIFDCWMRVDA--QPFKSALLNVVKRWSLMFKQHLIDH 1093

  Fly   724 MYETNEVLLDRCLEMFRRIAERPIS--------------IEHLYEIRDFAQTVPDLVDELKADIQ 774
            :  ||. |.|  ||.|.::|||.:|              :.||..:::......||.:.||..|:
 Frog  1094 V--TNS-LAD--LEEFIKVAERGLSKQLKEGDYNGLVEIMGHLMAVKERQANTDDLFEPLKQTIE 1153

  Fly   775 VMWL-EYDLLDSFFYNLSDHQFAMKWNVYAWPHQIMVRLSTLKDEQKVDIEDFLRLHASECQAFE 838
            ::.: :.:|.|..:..|  .:...|||      .|.....|:|       :....|.|:|.....
 Frog  1154 LLKVYDQELPDEVYKQL--EELPEKWN------NIKKMAITVK-------QQVAPLQANEVALLR 1203

  Fly   839 ERLESLNDEVQAYSLAFNTNR-------AQETSVDIKKTWALIKELEKVSQTLQFRQELFELEPL 896
            ....:.:.|...:..||....       :...::|.|.  ..||.:|....::.....|||:   
 Frog  1204 RNCATFDVEQHKFREAFRKQAPFRFDSISPYQTLDAKN--VEIKAMESTMSSIYESAALFEV--- 1263

  Fly   897 SVEFLESIIASFTPYKNLWYGCANFLKLEDATLGNPIAQLDLEDVWNNLMRLRDELN--ESMKIF 959
                      :...||.| ..|...:.|             |:::|:.:..::..:|  ::.:..
 Frog  1264 ----------NIPDYKQL-KQCRKEVCL-------------LKELWDMIFLVKSNMNDWQTTRWR 1304

  Fly   960 HEKVEIMDV-AKTFIAKI----------DDFVPVYNSIKDI----------RNENWMYIHWQELS 1003
            ...||.||: .|.|...|          |.|..:.|.:|:|          :|......||.:|.
 Frog  1305 EINVENMDLECKKFAKDIRNLDKEMRAWDAFTGLDNQVKNILTSLRAVAELQNPAIRERHWSQLM 1369

  Fly  1004 AITGQEIKYSVAMNYQYLIRKGILDVLPEVHIISEKANNE--AEEIRRAIE 1052
            ..||.............|::..:.:...||..|.:||..|  .|::.:.::
 Frog  1370 QATGVRFTMDEDTTLADLLKLNLHNFEDEVRGIVDKAVKEMGMEKVLKELD 1420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sacNP_649475.3 DHC_N2 901..>1042 CDD:462462 32/163 (20%)
dnah9XP_031750656.1 DHC_N1 193..768 CDD:462457 46/253 (18%)
DHC_N2 1271..1677 CDD:462462 32/164 (20%)
DYN1 1498..4151 CDD:227570
AAA_6 1811..2137 CDD:463697
MT 3046..3389 CDD:463699
AAA_9 3415..3633 CDD:463702
Dynein_C 4168..4463 CDD:465677
Blue background indicates that the domain is not in the aligned region.

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