DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sac and dnah1

DIOPT Version :10

Sequence 1:NP_649475.3 Gene:sac / 40568 FlyBaseID:FBgn0037254 Length:1079 Species:Drosophila melanogaster
Sequence 2:XP_012816961.1 Gene:dnah1 / 100036734 XenbaseID:XB-GENE-920106 Length:4204 Species:Xenopus tropicalis


Alignment Length:1168 Identity:282/1168 - (24%)
Similarity:523/1168 - (44%) Gaps:166/1168 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 STSSISNKGPDDSQFKREAEKAICIMPPRPGTTMMN---YQEL--YIPRNQLTDV-----YYPIQ 76
            |.|.|.|..|.......:.....| :|||...||..   |.::  :...:.|.||     ..|  
 Frog    15 SPSQIYNGIPPHPPPPAQGSSGHC-LPPRKYPTMKQRGFYSDILTHTASSLLRDVNAGPHVQP-- 76

  Fly    77 EAQRWLTLMDKMGKAHRFPLPTI--LPKVIQT----------------------RYVPKRHL--- 114
                  .|:.:..:.|..|..|.  :|...||                      .|.||..|   
 Frog    77 ------DLLRQADQEHNTPKVTSFQIPSNFQTYIDKQVIGPTTEVLLKSDFAKGGYEPKVQLPFL 135

  Fly   115 ------PKDVEVDRRRRQYQKINLVNELAKAGLTDDVLQPTEEQYNVMSEFA------FPHKFPL 167
                  |:.:|::|||::|.|:::...|...|:..::|.|.......:....      .|...||
 Frog   136 VAPGQCPRKIELERRRQEYMKLDIAKLLISKGIDSNLLMPRHTDAKNLPSIGQRTGSLLPTYLPL 200

  Fly   168 SYFDDSNFDINSPAAWFELGVV--GDAHYPLPAKAYLPYNQSL---------LNCQWGMAAVTAH 221
            ..|||..:|:.:...|..||..  .....|:|.||.||.:..|         |..:|....|..:
 Frog   201 EVFDDEEYDVRTWTDWLSLGYEEGSTERKPIPGKALLPVDDVLGHDDPKNPKLVYEWCSVGVLDY 265

  Fly   222 HEDSDLW--------TLLSLEDGCTYT-----------------VPKLQFMFMAEDPHKYIKRLQ 261
            .::..|:        .||:..|..:|.                 ||:::.:|.||:|.::.||:.
 Frog   266 DQERKLYLVHKATSNRLLNSADITSYQRNGSSVSAATLNLYEYWVPRIRLLFCAENPRRFAKRIV 330

  Fly   262 AAVHERHKGEQLMLMELIVDCV---------------LHEDIESTVFYSFKPIESVLQAAKVSEQ 311
            ||...|.|.|.|:|..|.:||:               :.:.:.||  ...|..:.||...|:   
 Frog   331 AANKLRKKTEALLLYNLYIDCMPGNGRCVIPSESLNRMKQWLLST--SHMKQDDGVLHQLKI--- 390

  Fly   312 CKRRLRSEVNLVFERLMALYELEQFILKMPKEF-----PQFRNINLKEFLPRSFAVDVSGKERLE 371
                |..|:::.:||.|.....:|.:...|::|     |.    .::|.:|....|:|       
 Frog   391 ----LEMEISMEYERTMNKLTFDQLVTSNPQKFAYVTLPD----RVEEMVPEHGLVNV------- 440

  Fly   372 LQALGITMQEKRYDYLK-------ASLFYCVGGIEAMAGVAIECQYIETLSIFICSFSKPLALVD 429
                      ..|:|.|       .:|......|.::..|.:||..:.::::|..|.:|.:.|.:
 Frog   441 ----------PEYNYAKNQAAFTFKTLLTRPEVITSLCKVRVECNRVSSMTLFHSSMAKCVRLEE 495

  Fly   430 FLQAQEAHSDNVATFLKVYWPQQLTTVITVVLRALGKGWLDISLNTWTVYLMCKISRFILQVKFR 494
            |.|.|......|..|||..|...|...:...||.:||||.|:....|.||.|.|:.:.:..:||.
 Frog   496 FEQTQSQTFSQVQLFLKDSWVSTLKNAVRSSLRDVGKGWYDLHECNWEVYQMSKLRQLMELIKFN 560

  Fly   495 MQESMEVLLETSLMNFSHFVCDPCLQFLELKSNYKWTNNYIDTEF-PFQKPVFAMTLGISEDRKV 558
            :|:|:..|::.||::|:..:.|.|...|....:..|..:.:::.: |.:.|:|.:.| :.::..|
 Frog   561 LQDSLRFLVQDSLVSFTQLIMDACCSVLSCTEDMDWGGDLVNSPYKPRKNPIFLLDL-VLDNSGV 624

  Fly   559 FYSTDPDEFQPGLVEIFKKCLEKSSGVRCIDGSVMSFLKFAPNLYILTVELIEDRFLRE---NEL 620
            .:||..:.|:..|:.:|.|.:..:..|..::..|:.      :|:|....|:|...|.|   .||
 Frog   625 HFSTPLENFELTLMSLFDKGILATHSVPQLEKFVLE------DLFICGTPLLESVGLHEPPVEEL 683

  Fly   621 ---LKNCYAKAVLPLRAYARLYERFIDFYLLNVNTYMQAYAQAHKPSSEVKRDILENKRLKEELR 682
               ::....||::|||:||:.||::::....::.||::.:...:..:..:|..:.||...||.|.
 Frog   684 RKDIRTAICKALIPLRSYAKQYEKYLELNNTDLETYIRDFQSKNSSALNIKLAVQENLLEKERLD 748

  Fly   683 EILPAFITIGPFYINVDTMKQFMIKKRIEVVRRIFEYYVDRMYETNEVLLDRCLEMFRRIAERPI 747
            ..||:.|.:|||.|:::.:||.:.:||..:...:.|.....:.:..:.:.|:...:.|.:.|:|.
 Frog   749 NALPSSIIVGPFQISIEGVKQNLSRKRRNLSNALLELLAKSLRKEMDDISDQFRAISRSVYEKPN 813

  Fly   748 SIEHLYEIRDFAQTVPDLVDELKADIQVMWLEYDLLDSFFYNLSDHQFAMKWNVYAWPHQIMVRL 812
            |||.|.|:|::.:.||:.:..|:..|..:..:||::|.|.|:||...|:.||||.|||:::||.:
 Frog   814 SIEELTELREWMKGVPEKLKTLEEQITKVTSDYDVIDEFLYSLSQEDFSAKWNVIAWPNKVMVLM 878

  Fly   813 STLKDEQKVDIEDFLRLHASECQAFEERLESLNDEVQAYSLAFNTNRAQETSVDIKKTWALIKEL 877
            .::.::...|.|.|.::...:...|.|||:||...|..:|...:..||.|.:.::::....:||.
 Frog   879 DSICEQHTEDEEKFRKIQVMDQTNFLERLDSLQMVVAGFSTHVDITRAHEIANEVRRVHKQLKES 943

  Fly   878 EKVSQTLQFRQELFELEPLSVEFLESIIASFTPYKNLWYGCANFLKLEDATLGNPIAQLDLEDVW 942
            ::::.....|:.||.|...:.:.|..::.:|.|:::||...:::::..::.:.:|:..:|.|.:.
 Frog   944 QQMALLYNNRERLFGLPVTNYDKLVRMVKAFQPFRDLWTTASDWMRWNESWMNDPLTTIDAEQLE 1008

  Fly   943 NNLMRLRDELNESMKIFHEKVEIMDVAKTFIAKIDDFVPVYNSIKDIRNENWMYIHWQELSAITG 1007
            .|:......:::.:|.|.:.....:||:....:|::|.|....|:.:||......||:.||....
 Frog  1009 KNVTESYKVMHKCIKQFRDIPACQEVAQDIKERIEEFRPYIPLIQGLRNPGMRNRHWELLSEQIQ 1073

  Fly  1008 QEIKYSVAMNYQYLIRKGILDVLPEVHIISEKANNEAEEIRRAIEEEERRKQAELNAMLLRKQ 1070
            ..||....:|:...:...:.|.:..:..::|.|..|. .|.:|:::.|....:.|..:|..|:
 Frog  1074 INIKPKANLNFTRCLEMNLQDHIDSIAKVAEIAGKEF-AIEQALDKMENEWASVLFTILPYKE 1135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sacNP_649475.3 DHC_N2 901..>1042 CDD:462462 29/140 (21%)
dnah1XP_012816961.1 DHC_N2 967..1370 CDD:462462 36/170 (21%)
DYN1 1063..3839 CDD:227570 17/74 (23%)
AAA_6 1497..1823 CDD:463697
AAA_8 2496..2757 CDD:463701
Dynein_C 3899..4200 CDD:465677
Blue background indicates that the domain is not in the aligned region.

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