DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lipt2 and Lipt2

DIOPT Version :10

Sequence 1:NP_649472.1 Gene:Lipt2 / 40565 FlyBaseID:FBgn0037251 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_001102387.1 Gene:Lipt2 / 365314 RGDID:1305211 Length:231 Species:Rattus norvegicus


Alignment Length:222 Identity:99/222 - (44%)
Similarity:129/222 - (58%) Gaps:8/222 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PLVTVVRAGRHSYSAGLQLQQRLARSNQILNPPAEFRN-----YLVLQEHDPVYTVGLRTKDYTA 65
            |.|.::..||..||..|:||:...|..|....|.....     .||.:...||||.||| ...|.
  Rat     4 PAVRLLWLGRVHYSELLELQEHWLRQLQADPRPRTLSGTKAGVLLVCEPAGPVYTGGLR-GGLTP 67

  Fly    66 QDEDRLRRLGADFHRTDRGGLITFHGPGQLVAYPILHLGQFVPSIRWYVATLERMVVEACHQMGI 130
            ::..|||.|||:...|.||||.||||||||:.:|:|.|......:|.:||.||...|..|...|:
  Rat    68 EETMRLRALGAEVRATGRGGLATFHGPGQLLCHPVLDLRLLGLRLRTHVAALEACAVRLCELRGL 132

  Fly   131 SSAKATKD--TGIWVGDNKICAIGIHGSRYVTTHGIGLNCCTDLQWFEHIVPCGIEGKGVTSLSK 193
            ..|:|...  ||:|:|:.||||||:...|::|:||:.|||.|||.|||||||||:.|.||||||:
  Rat   133 RGARARPPPYTGVWLGERKICAIGVRCGRHITSHGLALNCSTDLTWFEHIVPCGLVGTGVTSLSE 197

  Fly   194 ELDRHFPVEEASGALLNSFAKVFECRL 220
            .|.|...|:|...:.|.:|.:.|:|.|
  Rat   198 ALQRLVTVDEVMPSFLVAFKETFKCTL 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lipt2NP_649472.1 LipB 10..216 CDD:319743 94/212 (44%)
Lipt2NP_001102387.1 LipB 7..220 CDD:319743 97/219 (44%)

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