DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lipt2 and AT1G47578

DIOPT Version :10

Sequence 1:NP_649472.1 Gene:Lipt2 / 40565 FlyBaseID:FBgn0037251 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_001185164.1 Gene:AT1G47578 / 10723096 AraportID:AT1G47578 Length:280 Species:Arabidopsis thaliana


Alignment Length:289 Identity:47/289 - (16%)
Similarity:80/289 - (27%) Gaps:125/289 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KNCKCNRWVISLQAAFDR---DDFEKLFRKAVQS------------------------------- 35
            |.|....|.:.|.::...   :.:|:..|.|::|                               
plant   221 KECGVENWSMDLISSLPHQTLEMWEESLRLAIESQPNHVSVYDLQVEQGTKFGNLYTPGQSPLPS 285

  Fly    36 -ITEEEFQRIPE-------FRHRE------DALACLFGRLLLRHSAQKFSGEPW----------- 75
             ....||.:...       :.|.|      |...|       :|:...:..:|:           
plant   286 ETQSAEFYKTASSMLRGAGYEHYEVSSYSRDGFKC-------KHNLIYWKNKPFYAFGLGSASYV 343

  Fly    76 NTIRFERTERGKPFLAVPAD-----------------------------TTFGLNVSHQGDYVAF 111
            ..:||.|..|.|.:....||                             |:.||.:...|:  ||
plant   344 GGLRFSRPRRLKEYTNYVADLENGAANWCGNGDVDLKDVATDILMLSFRTSKGLELKEFGE--AF 406

  Fly   112 ASSCSSKV---------GVDVMRLDNERNNKTADEYINSMAKSASPEELRMMRSQPTEAMKMTMF 167
            .|.....:         ...::.||:.|:....||:...:|               .:.:|:...
plant   407 GSEVVKSICKVYEPYVESGHIVCLDDMRSEVMIDEFKTLVA---------------NDEVKIEDH 456

  Fly   168 YRYWCLKEAILKATGVGIMKDLNSLDFRV 196
            .||..||:    ..|..:..:|.||.|.|
plant   457 VRYLRLKD----PDGFLLSNELISLSFGV 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lipt2NP_649472.1 LipB 10..216 CDD:319743 45/284 (16%)
AT1G47578NP_001185164.1 LipB 53..266 CDD:319743 8/44 (18%)

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