Protein Alignment srl and ppargc1b

DIOPT Version :9

• Sequence 1: NP_649469.2
• Gene: srl / 40562
• FlyBaseID: FBgn0037248
• Length: 1067
• Species: Drosophila melanogaster
• Sequence 2: XP_009289336.1
• Gene: ppargc1b / 555906
• ZFINID: ZDB-GENE-030616-43
• Length: 848
• Species: Danio rerio
• Alignment Length: 1128
• Identity: 198/1128 - (17%)
• Similarity: 341/1128 - (30%)
• Gaps: 434/1128 - (38%)

  Fly    36 LTDTLSGILPIAPTDESLLNHNREEDLQNRKNLLIYNDFLKQELSNHDANELNAQVYRSIADSGG 100
            |.:.||..:....|:.|...:..||         :.:|.|..:..:.|.::|:|..:.|: :...
Zfish     8 LDEELSSFVFNYLTENSGSQYGEEE---------VCSDRLDADFPDFDLSQLDASDFDSV-NCLS 62

  Fly   101 EIAY--EQQRQISAIVEYDKEDIK----------------IDGLTEEEDIQSQSTFRTRTDSSSI 147
            |:.:  ||.....|.::|...|.:                :||:. |:.:...|.|      .|:
Zfish    63 ELHWCNEQSDHSPASIQYSAGDPELFEEENAALLAALTDSLDGIV-EDGVGGLSVF------PSL 120

  Fly   148 GDYESHSSDYDDEFDIVNE----EKSPRLQ-------------------------VVHNNIGNLQ 183
            ||......:.:|:..:.:|    ..||..:                         .||.:....|
Zfish   121 GDEPEEGEEEEDDLPMESEPLPGSMSPETEDPSLLKKLLLTPPNVPVGLESHKDSGVHRHSSRNQ 185

  Fly   184 --------------SSCERKGRTL-STNTIISEVDALGLSIDVNNFDLADFITKDDFAENLNACR 233
                          |:.|||.|.: .:..:.:|:.. .|:...:|.|.....|:::..|     .
Zfish   186 HVKPVRPVLKKDKSSTQERKPRPVRPSGRLCTELHR-HLTTARDNEDTPSADTEEEEEE-----E 244

  Fly   234 KKESLQAQAQIKSNTLADVPILLNPPVATIVAKPGVPSSKPGDSDYDSDSIIDVETVDVLDMNMA 298
            ..||.:.:.:..|::..:..:.:.|      |||...|.|      :..|::::
Zfish   245 DSESEEEEEEESSSSEGESVVCIEP------AKPQFSSEK------ELHSVVEL----------- 286

  Fly   299 NIWSIDKPAKMGQTPDELRYVDN----VKADPSWSPRSAKKTTPTIKENKPEQLGNHQLAVPASN 359
                             ::|:..    |:...||..:..:                   |:....
Zfish   287 -----------------IKYMHTYCLPVRKQASWDRKERE-------------------ALARKA 315

  Fly   360 KPKHKNICLVPNKKQCDFLKRKVGSPSLSKLTKATTKKATESMSNKQPSVKNTQCTGLGLGGKNL 424
            ||:|..|...|                      .|::|.......:.|..:..:.       |..
Zfish   316 KPEHSQIPRPP----------------------PTSQKPASQTRPRMPFCRRREI-------KAH 351

  Fly   425 SLLKQERDAALSVCAAKPI---APPTLSTTTPTLTPPAKRKLNLEEYKQRRCGGVGAVYPKPTPP 486
            ||||:..:|..|...:||.   :||.:.:....:.|                    ||....:||
Zfish   352 SLLKELLEAVSSFDVSKPYRMHSPPYIHSRGAAIRP--------------------AVDVSSSPP 396

  Fly   487 KQAKIEVAAKRIAPTPVSKPTPSPKKAEIVNIVNSLKCPRTEQSSLPMDPITMAKNKVLRMLEMK 551
            :|.|.|         |......|.:||     ....|.|..|:.|                ..::
Zfish   397 RQPKAE---------PKDSDCESWQKA-----AKRPKSPEPEEGS----------------FSVR 431

  Fly   552 RAQQLKIIDSRVSAKVPRVTKLPPLKDIVKDTYCMETEDPGTEIAPLSNKLHPDYEEIIIVSASC 616
            |:::|....||.:.:| ||.             |..||....|
Zfish   432 RSRRLASFPSRFAKRV-RVN-------------CGRTEQCSEE---------------------- 460

  Fly   617 NTDITI--PPNQLSKASPRSLLKSS-----------------VLLYNISNG--QDANKNMSNSLI 660
              :||:  ||.....:...|..|.|                 :.|...|||  |.|||....:|.
Zfish   461 --EITVKHPPTDTESSQKSSSYKPSETHNNPCCSDEKRSCLCLPLATKSNGDTQYANKPFEQTLC 523

  Fly   661 AS-----------------IQSEVARQTSNTTLSTIQSNATKVMSSADKNCQHGEDMVIMHLPKD 708
            ..                 ::.|:.:..:...|||..|            |          |.:.
Zfish   524 MELCGTAGLTPPTTPPHKPVEDELFKPDAKADLSTKSS------------C----------LMRA 566

  Fly   709 RVRKTLVSIATQTDLQPEFPLLTLPPKRQSRERTRRNYRRRR--TQGSGSNMSTSSSDFSSDCSS 771
            .:||    :..||:|..:...:.......|:..|:|.|....  ..|.|.:..|::....|.|..
Zfish   567 NMRK----LPEQTELYAQLRRMGQTGDIDSKGGTQRAYGDHDYCLMGLGESRKTTAVLNGSQCHV 627

  Fly   772 LVSHRSRSQYDSIDQLRNLDVAATCGGSIGNGGYSSRSTQRHRSSVSSSSYSENGQYR---RRQR 833
            .|..:...:...:|                               |......|..:.|   ..|:
Zfish   628 EVKEKDEEEEMEMD-------------------------------VEKEEMEEKEEERVLTDCQQ 661

  Fly   834 RTSYNKRRSRNQKRGSTSSSCSGSEKSDRERSRSPHRKLRHSRSRSRSKSDTRYPNNNSSSNNNN 898
            ||..|          |.....|..|.|:....|||..:|           |.:.|.:.|..:.:.
Zfish   662 RTEVN----------SLVELPSPEETSEHSPVRSPSPEL-----------DAQSPVSCSPPSPSC 705

  Fly   899 RRGFFDRN--VSQPAVEER--------------RIVYVGRIEQETTKEILRRKFLPYGSIKQITI 947
            :..|.|.:  ....|.|:|              :::|:..:....|:.:||::|..:|..:...:
Zfish   706 KLSFSDESSETCHGANEKRSKTKCGQENDGNKCQVIYIHNLPSSVTQTMLRKRFEAFGHPEDCKV 770

  Fly   948 HYKENGMKYGFVTYERAQDAFTAIDTSHRDSQISMYDI---SFG-GRRAFCRSSYADLDNAGINN 1008
            ..|:. .:.|.:|....|:..|   :.||      :|:   |.| |.|.|.|..|.|||.||
Zfish   771 VIKKE-ERCGVITLRHTQNGQT---SRHR------WDLLGPSGGNGSRRFGRKRYIDLDEAG--- 822

  Fly  1009 YNSYVFPKEAPAPNVVEDSFEAL 1031
                        |..|:..::||
Zfish   823 ------------PGPVKSKYDAL 833

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
srl	NP_649469.2	RRM	<906..>975	CDD:223796	14/84 (17%)
		RRM_PPARGC1A_like	914..1002	CDD:240803	23/105 (22%)
ppargc1b	XP_009289336.1	RRM_SF	737..823	CDD:302621	26/110 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170595060
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR15528
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	2.030