DRSC/TRiP Functional Genomics Resources

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Protein Alignment srl and Pprc1

DIOPT Version :10

Sequence 1:NP_649469.2 Gene:srl / 40562 FlyBaseID:FBgn0037248 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_001333730.1 Gene:Pprc1 / 226169 MGIID:2385096 Length:1646 Species:Mus musculus


Alignment Length:872 Identity:212/872 - (24%)
Similarity:315/872 - (36%) Gaps:278/872 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 PPVATIVAKPGVPSSKPGDSDYDSDSIIDVETVDVL----DMNMANIWSIDKPAKMGQTPDELRY 318
            ||...:   |.||...| .|.|.|..     ....|    .:.....||...|..:...|.. |.
Mouse   940 PPTCNV---PWVPPPAP-VSPYSSSC-----AYGSLGWGPGLQQPPFWSTVSPPPLSSVPTG-RA 994

  Fly   319 VDNVKADPSWSPRS------------------AKKTTPTIKENKPEQLGNHQLAVPASNKPKHKN 365
            |.....:||..|..                  |....|.::..|||     ...||.|.:||||.
Mouse   995 VPPTPVEPSGDPAGPPEDVLPGPVTPSLSSGPASPAAPPVEPTKPE-----AQPVPVSPQPKHKV 1054

  Fly   366 ICLV--PNKKQCDFLKRK--VGSPSLSKLTKATTKK-----------------ATESMSNKQPSV 409
            ..||  |..|....|..:  |...|:|:..|:.|::                 ..:|...|.|:|
Mouse  1055 STLVQSPQIKAPPTLSTEGVVFEESVSERLKSETQENRPKEKPISTAIKSVPVPKQSAVAKLPAV 1119

  Fly   410 KNTQ----------------------CTGLGLGGKNL-SLLKQ-ERDAALSVCAAKPIAPPTLST 450
            ...:                      .:.:|:...:| |||:| |:..|...|.....|......
Mouse  1120 HPARLRKLSFLPTPRAQGPEDVVQAFISEIGIEASDLSSLLEQFEKSEAKKECPLPASADSLAVG 1184

  Fly   451 TTPTLTPPAKRKLNLEEYKQRRCGGVGAVYPKPTPPKQAKIEVAAKRIAPTPVSKPTPSPKKAEI 515
            .:.::..|.::| .|:..:......|..:.|..|||.|....:||                    
Mouse  1185 NSGSIDIPQEKK-PLDRLQAPELANVAGLTPPATPPHQLWKPLAA-------------------- 1228

  Fly   516 VNIVNSLKCPRT--EQSSLPMDPITMAKNKVLRMLEMKRAQQLKIIDSRVSAKVPRVTKLPPLKD 578
            |:::...|.|::  ::.:|..:.||.||                                ||.  
Mouse  1229 VSLLAKAKSPKSTAQEGTLKPEGITEAK--------------------------------PPA-- 1259

  Fly   579 IVKDTYCMETEDPGTEIAPLSNKLH-----PDYEEIIIVSASCNTDITIPPNQLSKASPRSLLKS 638
                |.|::      |.|...:.:|     .||         |....| ||    |..|..::..
Mouse  1260 ----TACLQ------EGAHSPSPVHVGSGDHDY---------CVRSRT-PP----KRMPALVISE 1300

  Fly   639 SVLLYNISNGQDANKNMSNSLIASIQSEVARQTSNTTLSTIQSNATKVMSSADKNCQHGEDMVIM 703
            ....:|:...||.......||.::........||...|    .:.|.| ..||.:..        
Mouse  1301 VGSRWNVKRHQDITIKPVLSLGSAAPPLPCTATSQEPL----DHRTSV-EQADPSAP-------- 1352

  Fly   704 HLPKDRVRKTLVSIATQTDLQPE-FPLLT-----LPPKRQSRERTRRNYRRRRTQGSGSNMSTSS 762
                        ..|..|.|.|| .|..:     .||:...::::.|.||:.             
Mouse  1353 ------------CFAPSTLLSPEASPCRSEMNARTPPEPSDKQQSMRCYRKA------------- 1392

  Fly   763 SDFSSDCSSLVSHRSRSQYDSIDQLRNLDVAATCGGSIGNGGYSSRS----TQRHRSSVSSSSYS 823
                  |.| ||..||                   |..|..|.||||    :.|...:.||||.|
Mouse  1393 ------CRS-VSPSSR-------------------GWQGRRGRSSRSVSSGSSRTSEASSSSSVS 1431

  Fly   824 ENGQYRRRQRRTSY---NKRRSRN-------QKRGSTSSSCSGSEKSDRERSRSPHRKLRHSRSR 878
            .:.:.|.|.|..|:   |||..|:       .:|.|:|||.|.|..|...|||||      |.|.
Mouse  1432 SSSRSRSRSRSRSFSPPNKRWRRSSCSSSGRSRRCSSSSSSSSSSSSCSSRSRSP------SVSP 1490

  Fly   879 SRSKSDTRYPNNNSSSNNNNRRGFFDRNVSQP--AVEERRIVYVGRIEQETTKEILRRKFLPYGS 941
            .| :||.|...::..:|::.:|    :.|.|.  |:||||:|::|:|....|:..|:::|..:|.
Mouse  1491 CR-RSDRRRRYSSYRANDHYQR----QRVLQKERAIEERRVVFIGKIPGRMTRSELKQRFSVFGE 1550

  Fly   942 IKQITIHYKENGMKYGFVTYERAQDAFTAIDTSH--RDSQISMYDISFGGRRAFCRSSYADLDNA 1004
            |::.|||::..|..||||||..|::||.||::.|  |.:....:|:.|||||.||:.||:|||  
Mouse  1551 IEECTIHFRVQGDNYGFVTYRYAEEAFAAIESGHKLRQADEQPFDLCFGGRRQFCKRSYSDLD-- 1613

  Fly  1005 GINNYNSYVFPKEAPAPNVVEDSFEAL 1031
              :|...:     .|||  |:..|::|
Mouse  1614 --SNREDF-----DPAP--VKSKFDSL 1631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
srlNP_649469.2 RRM_PPARGC1A_like 914..1002 CDD:409793 39/89 (44%)
Pprc1NP_001333730.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..61
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..250
Necessary for interaction with CREB1 and NRF1 and for transcriptional coactivation. /evidence=ECO:0000250 426..461
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 430..617
PHA03247 <582..1120 CDD:223021 44/194 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 647..762
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 774..885
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 979..1075 25/101 (25%)
PHA03247 <988..1384 CDD:223021 96/505 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1324..1509 65/255 (25%)
Necessary for interaction with CREB1 and NRF1. /evidence=ECO:0000250 1363..1434 26/109 (24%)
RRM_PRC 1523..1613 CDD:410035 39/89 (44%)
Blue background indicates that the domain is not in the aligned region.

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