Sequence 1: | NP_649469.2 | Gene: | srl / 40562 | FlyBaseID: | FBgn0037248 | Length: | 1067 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_036020787.1 | Gene: | Ppargc1a / 19017 | MGIID: | 1342774 | Length: | 819 | Species: | Mus musculus |
Alignment Length: | 959 | Identity: | 212/959 - (22%) |
---|---|---|---|
Similarity: | 338/959 - (35%) | Gaps: | 275/959 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 194 STNTIISEVDALGL------------SIDVNNFDLADFITKDDFAENLNACRKKESLQAQAQIKS 246
Fly 247 NTLADVPILLNPPVATIVAKPGVPSSKPGDSDYDSDSI-IDVETVDVLDMNMANIWSIDKPAKMG 310
Fly 311 QTPDELRYVDNVKADPSWSPRSAKKTTPTIKENKPEQLGNHQLAVPASNKPKHKNIC--LVPNKK 373
Fly 374 QCDFLKRKVGSPSLSKLTKATTKKATESMSNKQPSVKNTQCTGLGLGGKNLSLLK---------- 428
Fly 429 ----QERDAALSVCAAK------------PIAPPTLSTTTPTLTP---------PAKRKLNLEEY 468
Fly 469 KQRRCGGVGAVYPKPTPPKQA----------KIEVAAKRIAPTPVSKPTPSPKKAEIVNIVNSLK 523
Fly 524 CPRT----------EQSSLPMDPITMAKNKVLRMLEMKRAQQLKIIDSRVSAKVPRVTKLPPLKD 578
Fly 579 IVKDTYCMETEDPGTEIAPLSNKLHPDYEEIIIVSASC--------NTDI-------TIPPN-QL 627
Fly 628 SKASPRSLLKSSVLLYNISNGQDANKNMSNSLIASIQSEVARQTSNTTLSTIQSNATKVMSSADK 692
Fly 693 NCQHGEDMVIMHLPKDRVRKTLVSIATQTDLQPEFPLLTLPPKRQSRERTRRNYRRRRTQGSGS- 756
Fly 757 -----NMSTSSSDFSSDCSSLVS----------HRSRSQYDSIDQLRNLDVAATCGGSIGNGGYS 806
Fly 807 SRSTQR---HRSSVSSSSYSENGQYRRRQRRTSYNKRRSRNQKRGSTSSSCSGSEKSDRER-SRS 867
Fly 868 PHRKLRHSRSRSRSKSDTRYPNNNSSSNNNNRRGFFDRNVSQPAVEERRIVYVGRIEQETTKEIL 932
Fly 933 RRKFLPYGSIKQITIHYKENGMKYGFVTYERAQDAFTAIDTSH--RDSQISMYDISFGGRRAFCR 995
Fly 996 SSYADLDNAGINNYNSYVFPKEAPAPNVVEDSFEALLLQVKAKL--NAG 1042 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
srl | NP_649469.2 | RRM | <906..>975 | CDD:223796 | 28/68 (41%) |
RRM_PPARGC1A_like | 914..1002 | CDD:240803 | 35/89 (39%) | ||
Ppargc1a | XP_036020787.1 | RRM_PPARGC1A | 674..764 | CDD:410034 | 35/89 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167849439 | |
Domainoid | 1 | 1.000 | 56 | 1.000 | Domainoid score | I10972 |
eggNOG | 1 | 0.900 | - | - | E1_28IAX | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S8229 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0006880 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR15528 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R5188 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
8 | 7.870 |