Sequence 1: | NP_649469.2 | Gene: | srl / 40562 | FlyBaseID: | FBgn0037248 | Length: | 1067 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002936759.2 | Gene: | ppargc1a / 100491667 | XenbaseID: | XB-GENE-494718 | Length: | 786 | Species: | Xenopus tropicalis |
Alignment Length: | 931 | Identity: | 200/931 - (21%) |
---|---|---|---|
Similarity: | 333/931 - (35%) | Gaps: | 268/931 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 201 EVDALGLS-IDVNNFDLADFI----TKDDFAENLNACRKKESLQAQAQIKSNTLADVPILLNPPV 260
Fly 261 ATI-VAKPGVPSSKPGDSDYDSDSIIDVETVDVLDMNMANIWSIDKPAKMGQTPDELR------- 317
Fly 318 -----------YVDNVKADPSWSPRSAKKTTPTIKENKPEQLGNHQLAVPASNKPKHKNIC--LV 369
Fly 370 PNKKQCDFLKRKVGS---PSLSKLTKATTKKATESMSNKQPSVK-----NTQCTGLGLGGKNLSL 426
Fly 427 LKQERDAALSVCAAKPIAP--PTLSTTTPTLTPPAKRKLNLEEYKQRRCGGVGAVYPKPTPPKQA 489
Fly 490 KIEVAAKRIAPTPVS--KPTPSPKKAEIVN------IVNSLKCPRTEQSSLPMDPITMAKNKVLR 546
Fly 547 MLEMKRAQQLKIIDSRVSAKVPRVTKLPPLKDIVKDTYC----------------------METE 589
Fly 590 D--PGTEIAPLSNKLHPDYEEIIIVSASCNTD---ITIPPNQLSKASPRSLLKSSVLLYNISNGQ 649
Fly 650 DANKNMSNSLIASIQSEVARQTSNTTLSTIQSNATKVMSSADKNCQHGEDMVIMHLPKDRVRKTL 714
Fly 715 VSIATQTDLQPEFPLLTLPPKRQSRERTRRNYRRRRTQGSGSNMSTSSSDFSSDCSSLVSHRSRS 779
Fly 780 QYDSIDQLRNLDVAATCGGSIGNGGYSSRSTQRHRSSVSSSSYSENGQYRRRQRRTSYNKRRSRN 844
Fly 845 QKRGSTSSSCSGSEKSD----------RERSRSP---------HRKLRHSRSRSRSKSDTRYPNN 890
Fly 891 NSSSNNNNRRGFFDRNVSQPAVEERRIVYVGRIEQETTKEILRRKFLPYGSIKQITIHYKENGMK 955
Fly 956 YGFVTYERAQDAFTAIDTSH--RDSQISMYDISFGGRRAFCRSSYADLDNAGINNYNSYVFPKEA 1018
Fly 1019 PAPNVVEDSFEALLLQVKAKL 1039 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
srl | NP_649469.2 | RRM | <906..>975 | CDD:223796 | 23/68 (34%) |
RRM_PPARGC1A_like | 914..1002 | CDD:240803 | 29/89 (33%) | ||
ppargc1a | XP_002936759.2 | ABC_tran_Xtn | 622..>660 | CDD:378973 | 7/44 (16%) |
RRM_PPARGC1A | 663..753 | CDD:241067 | 29/89 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 57 | 1.000 | Domainoid score | I10731 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0006880 | |
OrthoInspector | 1 | 1.000 | - | - | otm48671 | |
Panther | 1 | 1.100 | - | - | O | PTHR15528 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.100 |