Protein Alignment srl and ppargc1b

DIOPT Version :10

• Sequence 1: NP_649469.2
• Gene: srl / 40562
• FlyBaseID: FBgn0037248
• Length: 1067
• Species: Drosophila melanogaster
• Sequence 2: XP_002936744.3
• Gene: ppargc1b / 100488947
• XenbaseID: XB-GENE-1004403
• Length: 937
• Species: Xenopus tropicalis
• Alignment Length: 1020
• Identity: 194/1020 - (19%)
• Similarity: 328/1020 - (32%)
• Gaps: 335/1020 - (32%)

  Fly   249 LADVPILLNPPVATIVAKPGVPSSKPG-----------------DSDYDSD-------------- 282
            :||...||:..:.:.|......|.:||                 .||:||:
 Frog     1 MADCSTLLDEELESFVFNYLTDSPEPGVEPLSLDFPEIDLSQLDASDFDSNTCFNELQWYNDQSE 65

  Fly   283 ------SIIDVETVDVLDM-NMANIWSIDKPAKMGQTPDELRYVD------------NVKADPSW 328
                  |..|.|.:.::|. |.|.:      |.:.||.|::...|            ||...|..
 Frog    66 NESSQYSTDDSELLQIIDSENEALL------AALTQTLDDIHDDDISLSAFVSAGDENVGPLPVL 124

  Fly   329 SPRSAKKTTPTIKENKPEQLGNHQLAVPASNKPKHKNICLVPNKKQCDFLKRKVGSPSLSKLTKA 393
            ||:.:....|...|::.|.....:|.:..:..|       :..:.|.|...|:.|:   ||....
 Frog   125 SPKPSLAELPLSPESEDELSILKKLLLSPAQTP-------IATETQKDGNSRRQGT---SKFRPQ 179

  Fly   394 TTKKATESMSNKQ---PSVKNTQCTGLGLGGKNLSLLKQERDAALSVCAAKPIAPPTLS------ 449
            ......||.:::|   |..::..||.|   .::|              .:.|..|...|
 Frog   180 RAYSKVESPTDRQSGFPQAQSRSCTEL---HRHL--------------VSTPCVPQATSFSKDNS 227

  Fly   450 ---------------------TTTPTLTPPAKRKLNLEEYKQRRCGGVGAVYPKPTPPKQAKIEV 493
                                 |....||||.      ||.|           |:.|..|:.:..|
 Frog   228 QDCTKEGESDSYEEEGHSEDDTLDTLLTPPP------EEQK-----------PQFTCEKEKRAVV 275

  Fly   494 AAKRIAPT---PVSKPTPSPKKAEIVNIVNSLKCPRTEQSSLPMDPITMAKNKVLRMLEMKRAQQ 555
            ...|...|   ||.|...|.|...         |.|.:..|.|.              ....:.|
 Frog   276 DLIRYMHTYCLPVKKHLSSEKHQH---------CKRPKLESTPQ--------------SYSCSNQ 317

  Fly   556 LKIIDSRVSAKV------------PRVTKLPPLKDIVKDTYCMETEDP---------------GT 593
            .|.:||| ||||            |..|:...||:::....|.:...|               |:
 Frog   318 GKRLDSR-SAKVSCPAVGKYKWTKPAGTRFSILKELLAKDVCGDVSKPYRLAQPVYAAFSDSCGS 381

  Fly   594 EIAPLSNKLHPDYEEIIIVSASCNT---DITIPPNQLSKASPRSLLKSSVLLYNISNG--QDANK 653
            :....:||  .|..::   ..|.||   ::|:...|..:.|..::.:||.|....|..  .|...
 Frog   382 DFIKRNNK--KDESDL---GKSANTAQENLTVKTAQKQENSIYAVRRSSRLNPEFSEWFFDDETS 441

  Fly   654 NMSNSLIASIQSEVARQTSNTTLST---------IQSNATKVMSSADKNCQHGE------DMVIM 703
            .::....||...:....|.:..|::         .:....:::...||..|..:      |.||.
 Frog   442 PVTCVTQASADLDFMSATGDFCLTSESFGDEGEVAEVEVGELLDPLDKFLQERDLDEAQIDSVIQ 506

  Fly   704 HLPKDRVRKTLVSIATQTD---------------------LQPEFPLLTLPPKRQSRERTRR--- 744
            .| :.|...:..|:.:|.|                     |.|.    |.||.:.:.|...:
 Frog   507 QL-QTRDSSSCSSLPSQNDSTFENGNFEQALTVELCGTAGLTPP----TTPPYKPTEEDLYKPEP 566

  Fly   745 --------NYRRRRTQGSGSNMSTSSSDFSSDCSSLVSHRSRSQYDSIDQLRNLDVAATCGGSIG 801
                    .:.:........:::..::....:.:.|.::.||:. |...::.:..:......|.|
 Frog   567 LKSEPLISTHCKIEVTEEHRSVNKKTAKKHPERTELFAYLSRTA-DPPARVESQGIKRPLSRSFG 630

  Fly   802 NGGY-----SSRSTQR-----------------------HRSSVSSSSYS---ENGQ-YRRRQRR 834
            :..|     |..:.||                       |:.:|...:..   :||: .:..:.|
 Frog   631 DHDYCQVRKSETAFQRKVIRSLDLPSCVETKPKQALLPLHQRNVEKKTEGTPRDNGKLLKDHEIR 695

  Fly   835 TSYNKR---RSRNQKRGS---------------TSSSCSGSEKSD-----------RERSRSPHR 870
            .|..|.   ...|.|..|               :||.||...:.|           .||:.|...
 Frog   696 ASLTKHFGLPDHNLKDESDALYNSPEYDSVFDDSSSECSSPVEDDGFFSPLRSKICLERNTSSKP 760

  Fly   871 KLR------------HSRSRSRSKSDTRYPNNNSSSNNNNRRGFFDRNVSQPAVEERRIVYVGRI 923
            ||:            |..||.|.:......:.:..|...::|..  :...:.||.|.|::|:..:
 Frog   761 KLQCYPLNRTRPRSLHHSSRDRPRVFRHERDEHQGSRQPSQRQI--QRKREKAVGEGRLIYIRNL 823

  Fly   924 EQETTKEILRRKFLPYGSIKQITIHYKENGMKYGFVTYERAQDAFTAID--TSHRDSQISMYDIS 986
            ....:...|:|:|..:|.|.:..:..|..|.||||:||..::.|..|:.  .|.|........:|
 Frog   824 SNSISANELKRRFEVFGEITECRVLLKSRGEKYGFITYRHSEHAALALQKGASLRKRSEPPLHLS 888

  Fly   987 FGGRRAFCRSSYADLDNAGINNYNSYVFPKEAPAPNVVEDSFEAL 1031
            :||.|.|..:.|.|||:..:.           |:..|.:..:|::
 Frog   889 YGGLRHFFWTKYNDLDSNAVE-----------PSSTVKKSKYESM 922

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
srl	NP_649469.2	RRM_PPARGC1A_like	914..1002	CDD:409793	27/89 (30%)
ppargc1b	XP_002936744.3	RRM_SF	809..904	CDD:473069	29/94 (31%)