DRSC/TRiP Functional Genomics Resources

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Protein Alignment lost and Mthfs

DIOPT Version :9

Sequence 1:NP_649466.1 Gene:lost / 40559 FlyBaseID:FBgn0263594 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001097432.1 Gene:Mthfs / 37699 FlyBaseID:FBgn0085453 Length:201 Species:Drosophila melanogaster


Alignment Length:160 Identity:38/160 - (23%)
Similarity:72/160 - (45%) Gaps:22/160 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KRSLRVQTWKKIQEGKVGIGFNNIFNRIPSFVGADKAAALFANEEEFKKAQHIKVNIDRVLHEFK 98
            :.:|:|...|::::...||....|..:      :....|.....|.|::||.:.:.:. ...|..
  Fly     6 QNTLKVALRKRMKDALKGIDAEAIARQ------SQAVTAKVLQSEIFRQAQRVSIYLS-TASELD 63

  Fly    99 ELALLA-----DKSVYLPSTRESSALCLKVDVLADATEEQK-----KEALRVQDIQKFRSEIGLD 153
            ..|||:     :|.|::| |.|.|.:.:   |.....||.:     |..::..|.::.| |..:.
  Fly    64 TTALLSEMFRLEKMVFVP-TYEGSRMKM---VRLRGMEEYESLPLTKWNIKQPDFKEAR-EDAMT 123

  Fly   154 SGLKLDIVVIGSVVVSREGYRIGRGNGFAD 183
            :|..:|:.::..|..:|.|.|:|.|.|:.|
  Fly   124 NGHGIDLFIVPGVAFTRCGARMGHGMGYYD 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lostNP_649466.1 5-FTHF_cyc-lig 67..238 CDD:294257 32/127 (25%)
RRM_MTHFSD 384..455 CDD:240716
MthfsNP_001097432.1 5-FTHF_cyc-lig 10..201 CDD:294257 37/156 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0212
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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