DRSC/TRiP Functional Genomics Resources

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Protein Alignment lost and Mthfsd

DIOPT Version :10

Sequence 1:NP_649466.1 Gene:lost / 40559 FlyBaseID:FBgn0263594 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_006530998.1 Gene:Mthfsd / 234814 MGIID:2679252 Length:444 Species:Mus musculus


Alignment Length:275 Identity:55/275 - (20%)
Similarity:86/275 - (31%) Gaps:71/275 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 ATLIFSKNAVICLRDGKLCLLFRVGDMRKSSLAEAHVRLQMIKRCVTYEGEL--LPFHQFDMDVG 240
            |..:|.|:.   |.|..:.|   ||......|::.|:.|.  |...| ||.|  ..:|..:... 
Mouse  1003 AITMFKKHK---LYDDMIRL---VGKHHPDLLSDTHLHLG--KELET-EGRLQEAEYHYLEAQE- 1057

  Fly   241 YDQGLDRVFVIWPITICHEIDERSPLWEIGADDLKSAKFEIIAILEGVVESVGSTTQARTSYLPS 305
                       |..|:  .:...|.|||   :..:.||      ..|     |:......:||.:
Mouse  1058 -----------WKATV--NMYRSSGLWE---EAYRVAK------AHG-----GANAHKHVAYLWA 1095

  Fly   306 EILWGHR----------FEKLVHYKKENGQYNIDFGKFHNVYSVNTPTCSAAEIERLRSEGIFNE 360
            :.|.|..          .|..:.:..:|..:...|..........||.........|..||.|.|
Mouse  1096 KSLGGEAAVRLLNKLGLLEAAIDHAADNCSFEFAFELSRLALKHKTPEIHLRYAMYLEDEGKFEE 1160

  Fly   361 SEYQMY---PPSDNKLNLLDNDEMSPVRDSIDLNQIQILRRDSDEDPDAGEE--------SMELV 414
            :|.:..   .|.:..|..:.|.:....:           |.....|||:..|        ::|..
Mouse  1161 AEAEFIRAGKPKEAVLMFVHNQDWEAAQ-----------RVAEAHDPDSVAEVLVGQARGALEEK 1214

  Fly   415 DLGIHHKCSIRSQSP 429
            |........:|:|.|
Mouse  1215 DFQKAEGLLLRAQRP 1229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lostNP_649466.1 5-FTHF_cyc-lig 34..232 CDD:444864 16/55 (29%)
RRM_SF 384..455 CDD:473069 10/54 (19%)
MthfsdXP_006530998.1 5-FTHF_cyc-lig 81..278 CDD:444864
RRM_SF 369..438 CDD:473069
Blue background indicates that the domain is not in the aligned region.

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