DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9855 and AT1G11020

DIOPT Version :10

Sequence 1:NP_649463.2 Gene:CG9855 / 40556 FlyBaseID:FBgn0037242 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_563883.1 Gene:AT1G11020 / 837644 AraportID:AT1G11020 Length:321 Species:Arabidopsis thaliana


Alignment Length:127 Identity:33/127 - (25%)
Similarity:51/127 - (40%) Gaps:26/127 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VDCAAPSVDCATPAIPAVEDHTTLTVPPASANKATDASTSTAVQVAVDGGEPER----------- 63
            |....|.....:.:.|.:.|||          .::.||.|.|..||.:..|.:.           
plant     6 VQLQPPDSQKLSDSAPLLGDHT----------NSSSASPSAASVVAGNSDEIKAEEDLENDASSA 60

  Fly    64 -CCWICFATDEDNRLAAWVKPCQCRGTTKWVHQSCLYRWIDEKTQKGNALRTVSCPQCQTEY 124
             ||.||...|.:......:.||.|:||.::||:|||..|  ...::|.|..  .|..|:.::
plant    61 PCCRICLEDDSELLGDELISPCMCKGTQQFVHRSCLDHW--RSVKEGFAFS--HCTTCKAQF 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9855NP_649463.2 RING_CH-C4HC3_MARCH5 63..124 CDD:438361 20/72 (28%)
AT1G11020NP_563883.1 RING_CH-C4HC3_MARCH 63..115 CDD:438158 18/55 (33%)

Return to query results.
Submit another query.