DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9855 and CG17991

DIOPT Version :10

Sequence 1:NP_649463.2 Gene:CG9855 / 40556 FlyBaseID:FBgn0037242 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_651547.1 Gene:CG17991 / 43279 FlyBaseID:FBgn0039498 Length:294 Species:Drosophila melanogaster


Alignment Length:294 Identity:154/294 - (52%)
Similarity:194/294 - (65%) Gaps:11/294 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 ASTSTAVQVAV--DGGEPERCCWICFATDEDNRLAAWVKPCQCRGTTKWVHQSCLYRWIDEKTQK 108
            ||...|.|.:.  |..|.||||||||.||::....|||.||.||||.|||||||:..||||||:.
  Fly     2 ASNVAAPQASAGGDSTELERCCWICFETDKEAGRQAWVNPCLCRGTNKWVHQSCISLWIDEKTRI 66

  Fly   109 GNALRTVSCPQCQTEYIIVFPQMGKLGGALEAIDNLI-KRLSPFLAAGFFVGSLYWTAVTYGAVT 172
            .|.|:.||||||||||.|.:|.:.....|||..::|| ..|...||..|.|...||:||::||.|
  Fly    67 NNNLQAVSCPQCQTEYTIAYPNLWIFDRALELTNDLILTNLYNCLANVFTVVFAYWSAVSFGAKT 131

  Fly   173 FLQIVGHE-HGMSIMESGDPLVLLIGLPAIPVGLVLGRLIRWEDALLRLIRNRGTVVRKFPFVSL 236
            :|||.|.| |...|::|||.||:|:|.|.|.|.|:|||||.|||||||.||...:::|     ||
  Fly   132 YLQITGQEGHVHQIIQSGDLLVVLVGFPLISVVLILGRLIPWEDALLRFIRICYSLLR-----SL 191

  Fly   237 IYPNLSQEEEQQSISNPATPALSDPVSATRVFCGALLLPTISSIVGRILFDTVDNTLHRTLLGGL 301
            ....|.::.:.|:...|:.|...  .||:||.|||:||||||..|||:|:.:||:.|.:||||||
  Fly   192 SMMCLGRKYDHQTEPYPSAPMTE--YSASRVVCGAILLPTISMYVGRVLYSSVDDRLQQTLLGGL 254

  Fly   302 TFITVKGILKIYLKQKQYGRRKKRRIVDYTEENI 335
            |||.:||.||:||...||..|.|||::|||:||:
  Fly   255 TFIAIKGFLKMYLMHSQYICRMKRRVLDYTKENL 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9855NP_649463.2 RING_CH-C4HC3_MARCH5 63..124 CDD:438361 41/60 (68%)
CG17991NP_651547.1 RING_CH-C4HC3_MARCH5 21..82 CDD:438361 41/60 (68%)

Return to query results.
Submit another query.